Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02371 ATGAGCACTCAAGGGCAGGGAGGGATTGACCCTGTCGTCCTCGATGATATAATCAGACGGCTCACTGAAGTCCGATTGGCCCGACCTGGAAAGCAGGTCCAGCTCTCTGAGGCCGAGATCAAGCAGCTTTGTGTTGCCTCCAGAGAGATTTTTCTTCTGCAGCCCAATTTGCTTGAACTCGAAGCCCCCATCAAAATTTGTGGTGACATTCATGGACAGTACAGTGACTTATTGAGGCTCTTTGAATATGGGGGTTTCCCTCCTGATGCCAATTATCTCTTTTTGGGAGACTATGTTGATCGTGGGAAGCAGAGCTTAGAAACCATATGCCTTTTGCTTGcctataaaatcaaatttcctgagaactttttccttttgaggGGAAACCATGAATGTGCTTCCATTAATAGGATATATGGATTTTATGATGAATGTAAGCGACGGTTTAATGTGAGGCTGTGGAAAGCCTTTACAGACTGTTTCAACTGCCTTCCTGTGGCAGCTCTTATTGATGACAAGATATTGTGCATGCACGGTGGCCTTTCCCCTGACCTGGCGAACTTGGATCAAATTAGAAATCTACCTCGTCCAACTGCTGTTCCAGACACTGGCCTGCTTTGTGATTTGCTTTGGTCAGATCCTGGTAGAGATGTAAAGGGATGGGGTATGAATGACAGAGGAGTCTCGTACACCTTTGGCCCCGACAAGGTAGCTGAATTTTTGACAAAGCATGACTTGGACCTCATCTGTCGAGCACATCAGGTTGTGGAGGATGGGTATGAATTCTTTGCCGACAGGCAACTTGTTACCATATTTTCTGCTCCGAATTATTGTGGTGAGTTTGACAATGCTGGTGCCATGATGAGCGTGGATGAAAACTTGATGTGCTCATTCCAGATTCTTAAGCCTGCAGAGAAAATACCAAAGTTTGTGAtgtcaaacaaaatatg 950 0.4337 MSTQGQGGIDPVVLDDIIRRLTEVRLARPGKQVQLSEAEIKQLCVASREIFLLQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKFPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDDKILCMHGGLSPDLANLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLTKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKIPKFVMSNKI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02371 316 Gene3D - 9 314 IPR029052 -
Bva12g02371 316 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Bva12g02371 316 SMART pp2a_7 35 305 IPR006186 GO:0016787
Bva12g02371 316 SUPERFAMILY Metallo-dependent phosphatases 21 308 IPR029052 -
Bva12g02371 316 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Bva12g02371 316 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 9 309 - -
Bva12g02371 316 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Bva12g02371 316 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 309 - -
Bva12g02371 316 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Bva12g02371 316 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Bva12g02371 316 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Bva12g02371 316 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Bva12g02371 316 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Bva12g02371 316 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Bva12g02371 316 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Bva12g02371 316 CDD MPP_PP1_PPKL 13 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02371 Bva-Chr12 17999424 18003928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02371 64 248 Calmodulin-binding Proteins AT5G63870 32.273 2.33e-28 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02371 12 17999424 18003928 Bva12g02371 12 17999424 18003928 ECH