Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02360 ATGGTGACCATAACCTCTTCGTACACAGTCATTCCAAGCGAGGCTACTCCAAAGGGTCCTTTGTGGCTTTCTGAGGCTGATCAATTACTAAGTCCATGGACTCATACGCCTACTCTTTACATTTACAAGGCAAGCCAGAAGCACATGGTGtttgagaaaatgagagaCTCTCTTAGCAAGATCTTAGTCCACTACTACCCTCTAGCCGGCCGGCTGCGGTGGATTGAAGGTGGGAGATTGGAAGTGGACTGTAATGAAAAGGGAGTGACACTATTGGAAGCTGAAACTACAAGAGCACTGGATGACTATGGTGAGTTTGAAACCAATGAAGGCATCAAAAAGCACATTCCCAAAATAGAGGTTCAATATGGCGGCCCAATAGACGATATGCCCTTGTTTGTGGTGCAATTAACAAGATTCAGTTGTGGTGGCTTTTCTATTGGGATTGCCAATTCCCATGTCTTGTTTGATGGAGTTTCTGCCACTCGATTTGTGAACTCATGGGCCAAGATAGCTCGTGAAAAGGCATTAGACAAGGAAGAAATGCCATTTCTAGATCGAACCATTCTGAAATCTAGAAAACCTCTCATGGGATCTCGCTTCGATCACCCAGAATTCAAACCAATGCCACGTTTGTTAGCTAACTCAGGTGGTAACTTGGCTGAGATCAGCAAGAAGAAGACGAGCTTTGCATCATTGAAGCTCACAAAAGAGCAGCTATTGAAGCTAAAGATCAAAGCCAATGAAGGCATTAACATGGTGCAAGTACAGGAACACGTGGCTGGTCGTCCTTACAGCAGATTTGAAACTCTTGTTGCCCATATTTGGAGATCTGTGACTAAGGCCCGACAACGAGATATTCTTCAGGAAACAGCAGTTGGAACCGTTGCTGATATCAGGAACAGAATGAATCCTCCTCTCCCAAAGAACTATTTTGGGAATGCAATACTTCGAACGGTGACACCCACATGCCTCACTGGGGATATCATATCAAAACCATTGAGCTATGCAGCCCAAAACATAAGGGAAGCGATCAACAAACTTACAGAGGAGTACCTCAGATCTCAGCTTGATTTCCTAACCAGCCAGCCACAACTGGATTGGCTCAAGAACCCTCTTCGCCTAGTTGAACTTCCAGCTGAAGAGCAGTGTCTTGGAAATCCTAACATTATTATAGGGTGTTGGATGAGCATGCCGGTATACGATGCAGATTTTGGATGGGGAAAGCCTGTTTATATGGGTCCAGGACCTTTGGATGCAGATGGTGACATAATCATTATACCGGCGGCTACCGGGGATGGCTCTTATGTTATAGCTATTTGTTTGCAAACAGATCACTTGGAAGCTTTCAAGAGTATCTTCTATGAGGAAATatg 1376 0.4411 MVTITSSYTVIPSEATPKGPLWLSEADQLLSPWTHTPTLYIYKASQKHMVFEKMRDSLSKILVHYYPLAGRLRWIEGGRLEVDCNEKGVTLLEAETTRALDDYGEFETNEGIKKHIPKIEVQYGGPIDDMPLFVVQLTRFSCGGFSIGIANSHVLFDGVSATRFVNSWAKIAREKALDKEEMPFLDRTILKSRKPLMGSRFDHPEFKPMPRLLANSGGNLAEISKKKTSFASLKLTKEQLLKLKIKANEGINMVQVQEHVAGRPYSRFETLVAHIWRSVTKARQRDILQETAVGTVADIRNRMNPPLPKNYFGNAILRTVTPTCLTGDIISKPLSYAAQNIREAINKLTEEYLRSQLDFLTSQPQLDWLKNPLRLVELPAEEQCLGNPNIIIGCWMSMPVYDADFGWGKPVYMGPGPLDADGDIIIIPAATGDGSYVIAICLQTDHLEAFKSIFYEEI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02360 458 Pfam Transferase family 1 455 - -
Bva12g02360 458 Gene3D - 1 208 IPR023213 -
Bva12g02360 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 458 - -
Bva12g02360 458 Coils Coil 338 358 - -
Bva12g02360 458 Gene3D - 218 456 IPR023213 -
Bva12g02360 458 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02360 Bva-Chr12 17922751 17924330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02360 2 456 Monolignol Biosynthesis Gene Families AT5G48930 38.950 1.54e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02360 K13065 - gmx:100787038 437.573