Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02354 ATGGAGAACAATTCGATTGTCTTAATGCAAAGATATGAATTAGGAAGGTTACTAGGCCAAGGTACTTTTGGAAAGGTATACTATGCAAGGAGTGCAATCTCTAACCAGAGTGTAGCAATTAAAACTATCGACAAAAGTAAGATTGTGAAATCTGGGCAAGCTGAGCGGATTAAGCGTGAGATATCTGTTATGAGACTGGTTAGACATCCCAATATCATACAGCTTTATGAGGTTATGGCCACCAAGAGTAAGATTTACTTTGTTATAGAATATGCTAAAGGCGGTGAGCTCTTTGACAAGGTGTCCAAAGGAAAGCTGAAAGAGGAACTTgcacataaatattttcagcaACTAGTCAATGCAGTTGATTTTTGTCACAGTCGAGGTGTGTATCACCGAGATATAAAGCCGGAGAACCTTTTGTTGgatgaaaatgagaatttaAAGGTCTCTGATTTTGGGTTAAGTGCTTTAGCTGATTCCAAGCGACAGGATTGCCTGCTGCATACACCTTGTGGCACGCCTGCCTATGTAGCTCCAGAAGTCCTTAGAAGAAAAGGTTATGATGGTGCCAAAGCTGACGTATGGTCTTGTGGAGTGGTTCTATTTGTCTTATTGGCAGGTTATCTGCCTTTTCATGACTCAAATTTGATAGAGATGTATAGGAAGATTGGAAGAGCAGAATATAAATTTCCTAATTGGTTCTCACCAGAAGTACGCAAGCTCTTGTCCAAGATATTGAATCCAGATCCTGAAGCTAGAATTTCCATAGATAAGATAAAGGAACATTATTGGTACAAGAAAGGGCCAAATGCTAGACAAAAGAAACCTGTGGTGGAAAACAACAGTGTCTCTCCTTCAGGTTCAATTCCTTTTGATCAATGCAATGAAAGTGATAATACAACAGCAGAAACAAATGAAGAGTCCTTTGTGCCCACAAGTATAAATGCTTTTGACATCATCTGCCGTTCTGCTGGTTTTGATCTTTCTAGATATTTTGAAAACAGTTTTcacaagagagaagaaagattttCTTCAAGACAACCTGCTTCAGTCATTATCTCCAAGCTGGAAGAAATTGCCAAGTGGCTGAgactgaaaataaataaaaaagaagcgGGTTTATTGAAATTAGTGTCACGCAAGGAAGGTAAGAAGGGGATTTTATCCATTGATGCAGAGATCTTTGAAGTTACTCCATGTTTCCATTTGGTGGAgttgaaaaaatcaaatggaGATACGTTGGAATTTCAGAAAGTCTTAAAAGAGGATATAAGACCAGCTCTTCAGGATATTGTTTGGGTTTGGCAAGATGACCAACAAGAGCCATCAGAACAGCCACAGCAACAATTACAGACACATGAACAGCAGCAAGAACAATCATA 1385 0.3675 MENNSIVLMQRYELGRLLGQGTFGKVYYARSAISNQSVAIKTIDKSKIVKSGQAERIKREISVMRLVRHPNIIQLYEVMATKSKIYFVIEYAKGGELFDKVSKGKLKEELAHKYFQQLVNAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALADSKRQDCLLHTPCGTPAYVAPEVLRRKGYDGAKADVWSCGVVLFVLLAGYLPFHDSNLIEMYRKIGRAEYKFPNWFSPEVRKLLSKILNPDPEARISIDKIKEHYWYKKGPNARQKKPVVENNSVSPSGSIPFDQCNESDNTTAETNEESFVPTSINAFDIICRSAGFDLSRYFENSFHKREERFSSRQPASVIISKLEEIAKWLRLKINKKEAGLLKLVSRKEGKKGILSIDAEIFEVTPCFHLVELKKSNGDTLEFQKVLKEDIRPALQDIVWVWQDDQQEPSEQPQQQLQTHEQQQEQS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02354 461 SUPERFAMILY Protein kinase-like (PK-like) 8 297 IPR011009 -
Bva12g02354 461 CDD CIPK_C 316 430 - -
Bva12g02354 461 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Bva12g02354 461 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02354 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bva12g02354 461 MobiDBLite consensus disorder prediction 439 461 - -
Bva12g02354 461 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Bva12g02354 461 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 450 - -
Bva12g02354 461 Gene3D Transferase(Phosphotransferase) domain 1 99 312 - -
Bva12g02354 461 MobiDBLite consensus disorder prediction 276 306 - -
Bva12g02354 461 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02354 461 Pfam Protein kinase domain 12 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02354 461 Gene3D Phosphorylase Kinase; domain 1 5 98 - -
Bva12g02354 461 MobiDBLite consensus disorder prediction 273 306 - -
Bva12g02354 461 PANTHER - 2 450 - -
Bva12g02354 461 Gene3D Kinase associated domain 1, KA1 313 435 - -
Bva12g02354 461 Pfam NAF domain 312 370 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02354 Bva-Chr12 17892424 17895535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02354 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 66.079 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva12g02354 Pkinase 2.7e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02354 - - gmx:100790905 667.537