Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02348 ATGGGTAATAACAGGTTCAGATTGTCAGATATGATGCCAAATGCTTGGTTTTACAAGCTCAAAGACATGAGCAgagcaaggaagagaaatgGTTCTCATTCTATGAAGAACAAAGTAAGCTCACCAACAGCATCTCAAAGATCGCAGCCAAGGTATCCGAACTATTTCCCCACAGAAACAAGCAGAGCTGGTAAGTTATACAACTCACCCATTTACATCAAAGACTCGGATATCCCATTTCTTGATTCTCCACGAAGGTCATCCAAGAGAAGATCCAGGAGAAAAACCATTTACAAGCCTTCTCCCACTGTTTTCTCCTCCTCTCACTCTGCCACTGGCAGCTGTCATTCAACAAATAGTAGGACAAAGCCAAATCAAATTCAGTCTCCTGATTATTATGCCTCTTCCACTGAGAGTTCATCAGAATCAGACCCTCGTGAATATGTTACATCTGACTCTGAGTCTGATGGCTTTGCTGTTCCTGACTTGTTCAATGGGCTAGCCTCTAATTGCAGTTGCAGAGTCAGCTCTTCTACTAATGATATCATCATTGACATGAACCATGAATCCTTCAGAGGGGATTCTGAAAGGCTAGATGGGTTTGATACAATTTCAGAGTTAGATCTTCTTCCTCCAATATTGACTAAGCCGGTGAGATTTGATGATAAGATCATCGAGGCCGATGAGTTGAGAAATTCATCTAAATTGGATCATCATCTGCCAGCTCAACGGTCTCTATCTGTCAAAACTAGCAAGGAAGAAAGCACCAAGACTCAAAGAGAGCGAAAATTAAGTCCTTTGGCTCGAAAGTCTAGTACTAATTCTACAGGTATAAGACTTAGAGTCCATTCTCCTAAACTTGCTAGCAGGAAAGTTCAAGCCTATGCAAGAAGAAGTGTGTCATCCAATGCAAGCAAAGCTTCTGGGAACACAAGCTTTCCAGAGGGTTTTGCAGTTGTTAAGTCCTCTCTTGACCCACAAAGAGACTTCAGGGAGTCAATGGTGGAGATGATTGTGGAGAACAACATCAGGGCTTCTAAGGATTTGGAGGATCTGCTTGCCTGCTATCTCTCACTTAACTCAAGTGAATACCATGATCTCATTGTCAAAGCATTTGAGCAAATTTGGTTTGACATGGCTCAACTCAGACTATA 1154 0.4133 MGNNRFRLSDMMPNAWFYKLKDMSRARKRNGSHSMKNKVSSPTASQRSQPRYPNYFPTETSRAGKLYNSPIYIKDSDIPFLDSPRRSSKRRSRRKTIYKPSPTVFSSSHSATGSCHSTNSRTKPNQIQSPDYYASSTESSSESDPREYVTSDSESDGFAVPDLFNGLASNCSCRVSSSTNDIIIDMNHESFRGDSERLDGFDTISELDLLPPILTKPVRFDDKIIEADELRNSSKLDHHLPAQRSLSVKTSKEESTKTQRERKLSPLARKSSTNSTGIRLRVHSPKLASRKVQAYARRSVSSNASKASGNTSFPEGFAVVKSSLDPQRDFRESMVEMIVENNIRASKDLEDLLACYLSLNSSEYHDLIVKAFEQIWFDMAQLRL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02348 384 MobiDBLite consensus disorder prediction 27 61 - -
Bva12g02348 384 ProSiteProfiles OVATE domain profile. 319 378 IPR006458 -
Bva12g02348 384 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 383 IPR038933 GO:0045892
Bva12g02348 384 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 383 - -
Bva12g02348 384 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 317 379 IPR006458 -
Bva12g02348 384 MobiDBLite consensus disorder prediction 99 144 - -
Bva12g02348 384 MobiDBLite consensus disorder prediction 35 61 - -
Bva12g02348 384 MobiDBLite consensus disorder prediction 235 275 - -
Bva12g02348 384 MobiDBLite consensus disorder prediction 78 155 - -
Bva12g02348 384 MobiDBLite consensus disorder prediction 250 267 - -
Bva12g02348 384 Pfam Transcriptional repressor, ovate 323 379 IPR006458 -
Bva12g02348 384 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02348 Bva-Chr12 17861802 17863420 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Bva12g02348 Ovate 2.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02348 - - gmx:100798120 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02348 12 17861802 17863420 Bva12g02348 12 17861802 17863420 ECH