Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02347 ATGTATGCCAAGAGAGTTAATGAAGAGAACAAGGTGGATGAAAAAGCTGACCACCCTTATGTTGAAAAAGACCCAACTGGTCGCTATGGCCGGTTTGGAGACATTCTTGGGAAAGGGGCAATGAAGACCGTGTACAAAGCAATTGATGAGGTCCTTGGTATAGAGGTAGCCTGGAACCAGGTCAAACTCAATCAGGCACTTCACTCACCATATGATCTGCAGCGGCTTTACTCTGAGGTTCATCTCCTCAGTACCCTCAAGCATGAgtcaattattcaattttacaCCTCTTGGATTGATGTTGATGACAAGAGCTTCAACTTTATAACGGAAATGTTCACTTCGGGGACACTCAGAGAATACAGGATGAAATATAAGCAACTTGGAATACAAGCGATCAAGAGCTGGGCTCGCCAAATACTACTGGGTCTTGTTTATCTGCATGGCCATGATCCTCCAGTGATTCATAGGGACCTCAAAtgtgataatatatttatcaatggCCATCTTGGACAAGTGAAAATTGGTGATCTGGGACTAGCAGCAATCTTGCGTGGTTCCCAGCCAGCCCATAGTGTTATAGGAACTCCTGAGTTCATGGCACCAGAATTGTATGAAGAAGAATACAATGAACTAGTTGATGTGTACTCATTTGGCATGTGTGTCTTGGAAATGATTACATCTGAGTATCCTTATAGCGAATGTGCTAATCCTGCTCAGATCTACAAGAAAGTGACATCGGGGAAGCTTCCAGCGTCATTTTTCCGGATTGAAGACTTGGAAGCACAGAAATTTATTGGAAAATGTTTAGTACCTGCTGCAGAGAGGCCATCAGCAAAAGAACTACTTCTCGATCCATTTCTCATGTCCGATGATGCATTATCTATGATCAAGTTTGGAATTCAGAAACCTTTTCTGAATGACATTGATATGGAAAAGTTGAAGTTGATTGATAGTCCGCCCAAAACTGAAATGACTATCACCGGAAAGCTGAACCCCAAGGATGATACCATCTTTCTCAAAGTGCAAATTGCTGATAAAGATGGTTCTGCTAGGAATATCTATTTTCCCTTTGACATTTTCACTGATACCCCAATTGATGTTGCGACCGAGATGGTGAAAGAGTTGGAGATTAGTGATTGGGAGCCATTTGAAATTGCATGTATGATTGAAGAAGAGATATCTGCCATAATGCCACAGAGGAGGAAAATGGACAATTTTGACAAATACCATACCTTGAATTatcaagatgatgatgatatacCTCATCATTTccactctctctcttcttgttCATCTTCCCGGGAATCAATATCAGGCTTAGTCACAAAAGCTGAGGAATTCGCAAATGGATATTATTGGCTCCATGATGATTCGCTTGATGATACCAGTTCACGGTGCTCTTCACAAGGGACATATTCcaacttgaattatttttctgtcGATGACCCGGAGTCCAATATAACTTGtacaagaaaagataaacatcCCATCATAAAATGTCACAGTTGTACAAGATTTTCTCCCCCTGAAGATTCAAGTCTGTCTACAGGTCGGATTTGTTGCAAGCAGTGCAAAGTTCCAGTTGGATCGATGGCAGCTTGTACTAGTAAAAGTAAGAGGATGGACAATCGTAGATTAACAAGGAACAGGTCACTAATTGACATGCGTAGCCAATTACTACACCGCACATTGGTTGAAGAGGTAAACAAGAGACGTTTATTCAAAACAGTTGGAGCTGTGGAAAATATTGGTTTTCAGAATCCTTACGAGGTTTCCAGGAAAATGTCACAGCCAGCACGTAAGAAGTG 1811 0.392 MYAKRVNEENKVDEKADHPYVEKDPTGRYGRFGDILGKGAMKTVYKAIDEVLGIEVAWNQVKLNQALHSPYDLQRLYSEVHLLSTLKHESIIQFYTSWIDVDDKSFNFITEMFTSGTLREYRMKYKQLGIQAIKSWARQILLGLVYLHGHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMITSEYPYSECANPAQIYKKVTSGKLPASFFRIEDLEAQKFIGKCLVPAAERPSAKELLLDPFLMSDDALSMIKFGIQKPFLNDIDMEKLKLIDSPPKTEMTITGKLNPKDDTIFLKVQIADKDGSARNIYFPFDIFTDTPIDVATEMVKELEISDWEPFEIACMIEEEISAIMPQRRKMDNFDKYHTLNYQDDDDIPHHFHSLSSCSSSRESISGLVTKAEEFANGYYWLHDDSLDDTSSRCSSQGTYSNLNYFSVDDPESNITCTRKDKHPIIKCHSCTRFSPPEDSSLSTGRICCKQCKVPVGSMAACTSKSKRMDNRRLTRNRSLIDMRSQLLHRTLVEEVNKRRLFKTVGAVENIGFQNPYEVSRKMSQPARKK 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02347 603 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 598 - -
Bva12g02347 603 Gene3D - 324 405 - -
Bva12g02347 603 SUPERFAMILY Protein kinase-like (PK-like) 31 312 IPR011009 -
Bva12g02347 603 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02347 603 CDD STKc_WNK 28 288 - -
Bva12g02347 603 Gene3D Transferase(Phosphotransferase) domain 1 113 296 - -
Bva12g02347 603 ProSiteProfiles Protein kinase domain profile. 30 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02347 603 Gene3D Phosphorylase Kinase; domain 1 13 111 - -
Bva12g02347 603 MobiDBLite consensus disorder prediction 1 21 - -
Bva12g02347 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Bva12g02347 603 SMART serkin_6 30 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02347 603 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 1 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02347 Bva-Chr12 17854157 17859062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02347 20 595 MAP Kinase Kinase Kinase AT5G58350 59.932 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bva12g02347 Pkinase 6.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02347 K08867 - gmx:100272203 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02347 12 17854157 17859062 Bva12g02347 12 17854157 17859062 ECH