Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02323 atgaagaagagagaaacaaggGTATTATCAGTATCAATATCACGGTCAGAAGTAGAAGATCAAGTTATATTTTGGTCGGTGTTTCACTTTCACCTCCTGCTGCTGGTGCTGCTGCTGCTAGTCATGATGATTAATGCGTCAGGGTCTGGGTCAGGTGGTAGAGAGTTGGCAGCGTATCCCCAACAAGTTGAAGCTGGGTTGTTGATGGCTTTCAAGCACTCGTCTATTTCCTCTGATCCTACTAATTTCCTAGCAGGCTGGAATATTGCTAATTCCCCTAATCCCTGCTTATGGCGAGGCGTTTCCTGCTCTGCCGATGGCTCTGTTTCCACCCTGAACCTCACTCGTGCTGCCCTCATTGGCACCTTGCAACTTTCTCGTCTCACCGCCCTGCCCAATCTACGCCAACTCTTGTTGCATGGCAATTTCTTCACCGTCGACGGACATGGACACGGACAACTCTCTTCCTGTAACCTCGAGACCCTTGACTTGTCCGCAAACAATTTGTCCTCGGCTTCTTTTTCCGACTCAAATCTACTTTCCTGCCATAGTCTCATTCATCTCAATCTCTCCCGAAATTCTATCACTAAAGCCGCTCTCCAATTCGGTCCTTCTCTGCTTCAACTTGACCTCTCCCGCAATCGAATTTCTGACACTGCCTTTTTGTCATACACCCTGTCAAACTGTCAAAGTTTGCTTCTCCTCAATTTCTCTGACAACAATCTCTCTGCCAACCTCAATACCAGTCTTCTTTCCTCTTGTAAAAACCTTTCTATTCTTGACCTCTCCCACAATACACTCTCCGGTCGCATACCTATGGCTGATTCTCTTATCCATTTGGATCTCTCTAACAACAATTTCTCTGTCAACTTCTCTGACCTTGACTTTACCCACTGCAGCAGCCTCATCTCACTCCATCTATCTCACAACGCTCTCTCTGGCTCCCAATTCCCATCCACCTTCACCAACTGCCACCTTCTCCAGACTCTCGATCTTTCCCACAATCAACTCCAGCTCAAGATTCCAGGTGTCTTACTGGCAAGTTTCAAGAGTCTAAAACAACTCTCTCTGGCTCATAATAACTTTTATGGTCATATACCTGCTGAATTGGGAATGGCTTGTTCCTCCCTTGTTCTACTTGATCTTTCTGAAAACAGGCTTTCTGGTGAGTTGCCTTCAACCTTTACATCTTGCTCTTCTTTGCAGACTCTCAACCTTGGTAAGAATTATCTCTCAGGTGATTTCCTCAACTCCGTTGTCAGCGAACTCTCGGCTCTTAAATTCCTCTATGTCCCATTCAATAACATAACTGGTCTTGTTCCTTTGTCTCTCGCCAATTGTACAATGCTTCAGGTCCTTGACCTGAGTTCAAACGCCTTTACCGGCAATGTTCCTTTTGGGTTATGCTCATCGTCACCCTCTGGCTCGGCCTTGGAAAAGATACTTCTAGCTGACAATTACCTTTCAGGGCCACTACCTTCAGAGCTTGGGCGCTGCAAAAACATGAGGACtattgattttagttttaataacTTGAATGGTCCAATACCCTCAGAAATTTGGTCTTTACCTAGTCTTTCTGACTTGATTATCTGGGCCAATAACCTTACAGGCCAGATTCCACAAGACATCTGTGTCAACGGAGGAAACTTAGAGACCTTGATTCTCAACAACAATTTCATTTCGGGCACCATTCCTCAGTCAATTGCTAATTGTACCAATTTGATTTGGGTGTCACTTGCTAGCAATCAAATTAGTGGGGAGATACCTGCTGGTATTGGAAACCTAAATAACCTTGCAATCCTCCAATTAGGTAACAATTCACTTACAGGACAGATTCCCCCGGAGCTTGGAAAGTGTTGGAGCCTCATATGGCTAGATTTGAATAGTAATAACCTGACTGGTGCTATTCCATCAGATCTTGCCAATCAAGCTGGATTGGTCATTCCAGGAAGTGTTTCTGGGAAGCAATTTGCATTTGTAAGAAATGAAGGTGGGACAAGCTGCCGGGGTGCAGGAGGTTTAGTTGAATTTGAGGATATCAGAGCAGAGAGACTGGAAAGTTTTCCCATGATCCATTCCTGCCCATTAACAAGAATATACTCTGGTTTGACAGTGTATACCTTCACCAATAATGGCAGCATGATCTACCTTGATCTCTCCTACAACTTCTTGTCAGAAAGTATCCCTGAAAACTTAGGATCAATGACCTTTCTGCAGGTCTTAAATTTGGGACACAATAGGCTAACCGGAAAGATTCCTGGTAGTTTTGGTGGTCTGAAAAGTTTAGGAGTGCTAGATCTCTCTCATAATAACCTTCAAGGTTCCATCCCAGGATCATTGGGAACTCTATCTTTCCTTAGCGACCTGGATGTGTCTAATAATAATCTTACCGGTTCCATTCCTACTGGAGGTCAGCTGACCACTTTCCCTGCATCTAGATATGAAAACAATTCAGGTCTTTGTGGGGTCCCGTTACCACCATGTGGCTCTGGGAGCCACTCAGCAGGTTCACATACTTGGGAGAAGAGGCAGCCTATGGGAACCGGGATGATCATTGGCCTTGTTCTATTCTTCTTTTGTATTCTAGGAGTTCTTTTAGCTCTTTATCGAGTAAAGAAGTACCAGAGAAAGGACGAGCACAGtgagaaatatatagaaagtCTTCCAACTTCAGGTAGCAGCAGCTGGAAACTTTCCAGCATTCCTGAGCCTCTAAGCATCAATGTTGCCACTTTTGAAAAACCTCTGCGTAAGTTAACATTTGCTCATCTACTTGAGGCTACTAATGGTTTCAGTGCTGAAAGCTTGATAGGGTCAGGAGGTTTTGGTGAAGTCTACAAAGCTCAGCTGAAAGATGGTTGTGTTGTTGCTATCAAGAAGCTTATTCATGTCACAGGTCAGGGAGACAGGGAGTTCATGGCTGAAATGGAGACTATTGGGAAGATAAAGCATCGAAACCTGGTTCCTCTGCTCGGCTACTGCAAGGTTGGAGAGGAGAGGCTTCTTGTGTACGAGTACATGAAGTGGGGAAGTCTTGAGGCTGTTCTTCATGATAGGGTCAAAGGAGGAGGTTCAAAGCTTGACTGGGCAGCAAGAAAGAAGATTGCCATAGGGTCTGCAAGAGGTCTTGCATTTCTTCATCATAGCTGCATACCTCACATCATACACCGGGACATGAAATCTAGCAATGTTCTTCTTGATGAAAACTTTGAGGCCAGAGTTTCTGATTTTGGCATGGCAAGATTGGTTAATGCCCTTGACACTCATCTCAGTGTAAGCACACTAGCAGGAACACCAGGTTATGTGCCCCCCGAATACTATCAGAGTTTTAGGTGCACAACAAAAGGGGATGTCTATAGTTACGGTGTCATACTGCTTGAGCTTCTATCAGGGAAGAGACCGATTGATTCATCTGAGTTTGGTGATGATAACAATCTTGTTGGATGGGCAAAACAACTTCAGAGAGATAAAAGAACGAGTGAGATACTGGACCCGGAATTGATTATGCATACATCTATTGAAAGTGAACTATACCAGTGCTTAAGCATTGCATTTGGATGTCTAGATGACAGACCATATCGGCGGCCAACAATGATACAAGTGATGGCAATGTTCAAAGAACTTCAGGTTGACACAGAAAATGATATCCTTGATGGCTTCTCACTAAAAGATAACGTTATTGAGGAAGCATG 3695 0.4379 MKKRETRVLSVSISRSEVEDQVIFWSVFHFHLLLLVLLLLVMMINASGSGSGGRELAAYPQQVEAGLLMAFKHSSISSDPTNFLAGWNIANSPNPCLWRGVSCSADGSVSTLNLTRAALIGTLQLSRLTALPNLRQLLLHGNFFTVDGHGHGQLSSCNLETLDLSANNLSSASFSDSNLLSCHSLIHLNLSRNSITKAALQFGPSLLQLDLSRNRISDTAFLSYTLSNCQSLLLLNFSDNNLSANLNTSLLSSCKNLSILDLSHNTLSGRIPMADSLIHLDLSNNNFSVNFSDLDFTHCSSLISLHLSHNALSGSQFPSTFTNCHLLQTLDLSHNQLQLKIPGVLLASFKSLKQLSLAHNNFYGHIPAELGMACSSLVLLDLSENRLSGELPSTFTSCSSLQTLNLGKNYLSGDFLNSVVSELSALKFLYVPFNNITGLVPLSLANCTMLQVLDLSSNAFTGNVPFGLCSSSPSGSALEKILLADNYLSGPLPSELGRCKNMRTIDFSFNNLNGPIPSEIWSLPSLSDLIIWANNLTGQIPQDICVNGGNLETLILNNNFISGTIPQSIANCTNLIWVSLASNQISGEIPAGIGNLNNLAILQLGNNSLTGQIPPELGKCWSLIWLDLNSNNLTGAIPSDLANQAGLVIPGSVSGKQFAFVRNEGGTSCRGAGGLVEFEDIRAERLESFPMIHSCPLTRIYSGLTVYTFTNNGSMIYLDLSYNFLSESIPENLGSMTFLQVLNLGHNRLTGKIPGSFGGLKSLGVLDLSHNNLQGSIPGSLGTLSFLSDLDVSNNNLTGSIPTGGQLTTFPASRYENNSGLCGVPLPPCGSGSHSAGSHTWEKRQPMGTGMIIGLVLFFFCILGVLLALYRVKKYQRKDEHSEKYIESLPTSGSSSWKLSSIPEPLSINVATFEKPLRKLTFAHLLEATNGFSAESLIGSGGFGEVYKAQLKDGCVVAIKKLIHVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLEAVLHDRVKGGGSKLDWAARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLVNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLSGKRPIDSSEFGDDNNLVGWAKQLQRDKRTSEILDPELIMHTSIESELYQCLSIAFGCLDDRPYRRPTMIQVMAMFKELQVDTENDILDGFSLKDNVIEEA 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02323 1231 Gene3D Transferase(Phosphotransferase) domain 1 1008 1224 - -
Bva12g02323 1231 Pfam Leucine rich repeat 376 436 IPR001611 GO:0005515
Bva12g02323 1231 Pfam Leucine rich repeat 739 797 IPR001611 GO:0005515
Bva12g02323 1231 Pfam Leucine rich repeat N-terminal domain 66 104 IPR013210 -
Bva12g02323 1231 SUPERFAMILY L domain-like 93 343 - -
Bva12g02323 1231 PRINTS Leucine-rich repeat signature 760 773 - -
Bva12g02323 1231 PRINTS Leucine-rich repeat signature 257 270 - -
Bva12g02323 1231 Gene3D Ribonuclease Inhibitor 64 179 IPR032675 -
Bva12g02323 1231 Gene3D - 653 710 - -
Bva12g02323 1231 SMART LRR_typ_2 423 446 IPR003591 -
Bva12g02323 1231 SMART LRR_typ_2 131 154 IPR003591 -
Bva12g02323 1231 SMART LRR_typ_2 299 323 IPR003591 -
Bva12g02323 1231 SMART LRR_typ_2 349 373 IPR003591 -
Bva12g02323 1231 SMART LRR_typ_2 523 547 IPR003591 -
Bva12g02323 1231 SMART LRR_typ_2 596 620 IPR003591 -
Bva12g02323 1231 SMART LRR_typ_2 760 784 IPR003591 -
Bva12g02323 1231 SMART LRR_typ_2 374 397 IPR003591 -
Bva12g02323 1231 SMART LRR_typ_2 736 759 IPR003591 -
Bva12g02323 1231 ProSiteProfiles Leucine-rich repeat profile. 158 179 IPR001611 GO:0005515
Bva12g02323 1231 PANTHER UNNAMED PRODUCT 56 1223 - -
Bva12g02323 1231 SMART serkin_6 932 1206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02323 1231 SUPERFAMILY Protein kinase-like (PK-like) 913 1206 IPR011009 -
Bva12g02323 1231 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1055 1067 IPR008271 GO:0004672|GO:0006468
Bva12g02323 1231 Pfam Protein kinase domain 934 1204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02323 1231 Gene3D Phosphorylase Kinase; domain 1 895 1007 - -
Bva12g02323 1231 ProSitePatterns Protein kinases ATP-binding region signature. 938 961 IPR017441 GO:0005524
Bva12g02323 1231 Pfam Leucine Rich Repeat 550 572 IPR001611 GO:0005515
Bva12g02323 1231 PANTHER RECEPTOR-LIKE PROTEIN KINASE BRI1-LIKE 3 56 1223 - -
Bva12g02323 1231 ProSiteProfiles Leucine-rich repeat profile. 205 226 IPR001611 GO:0005515
Bva12g02323 1231 Gene3D Ribonuclease Inhibitor 203 830 IPR032675 -
Bva12g02323 1231 ProSiteProfiles Protein kinase domain profile. 932 1209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02323 1231 Pfam Brassinosteroid receptor island domain 646 710 IPR045381 -
Bva12g02323 1231 SUPERFAMILY L domain-like 280 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02323 Bva-Chr12 17672283 17676897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02323 64 1231 Receptor kinase-like Gene Family AT1G55610 65.114 0.0 1509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bva12g02323 Pkinase 9.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02323 - - tcc:18593159 1716.82