Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02310 ATGCCTCACAGAACGACTTACTTTTTCCCAAGGCAGTTCCCGGAACGTGGGTTGGATGAATCTTCCAAACAAGTATTAGATCACGAGAAGGAGAAAATCTTCAACTCCATCAAATCAGAAACCTTTGGTGTTGAAAGGGACAGGAAAAAGCCAGTATCAACTACTCCAGCTAAAGACGATGTCGTTTCCTGGTCGGGTAAACACTCAGCTGTATCTGACCTTTTCACGGGCGGTGACAAGCATCGGACCAAACAGAAACAAATTGCTGCTTTCGGCAATTGGTTGTTAGAGAAAAAGGGTGACAGATCGGGTCACGTGAAACCGTACTCGGATTGGTCATCGTGCGACGAAGACCGCGAGCTTCTGCTACCACCGGAGTCGGTGCCGGCTCCTGCTCCTCCTCCGCCGGAGACAGTGAAGGACACTGCCATTGACAGAGATTTTGATAGGCAGGTGTCATTGCCAAGGTTGTCGAGTGGGAGTAGCTATGCTGGGAGCTTGTTTTCGGGGACCACGTTGGACGGCGCCAATTTCTCTAGCGACATTAAGGAGGAGACGTCGTCATCTCGTGTCTCTTCCACAACAAGGAGGCAGGAGGAAGACGAGGAAGAGGGTAAAGAGAAGCTGGCACAGAAATACAAGGAAAGCTACTACTTGCAGCTTACGTTGGCCAAGAGGCTCACTTGTCTAGCAAGTCTTACTACGGAGCCTGTGCTTACCCTGGACACTGGAATCGAGACTTGGGACGCTGAAGTTGTTTCTTATCGTCTATGGgtGAGTGGCTGCTTATCATACTCTGACAAGATATCGGACGGTTTTTATAACATATTGGGCATGAATCCGTATCTATGGGTGATGTGTAATGAGGTCGAGGAAGGTAAAAGGCTCCCAACTCTGGTGGCTCTTAAAGAAGTTGAACCCAGTGAGACATCCTTAGAGGTAGTCCTTGTTGATAGACAGGAGGACTCTCGTCTAAAGGAGCTTCATGATAAAGCACAAGAATTGTATTGTGCTTCAGAGAACACCTTAGTATTGGTGGAACAGCTAGGAAAGCTTGTTGCTGTATGTATGGGggGCACCTATCCGGTGGAGCAAGGAGATCTTCACAAGCGTTGGAAGATGGTTAGTAAGAGATTGAGGAATTTTCATAAGTGTGTCGTGCTTCCTATAGGCAGCCTATCTAGCGGACTATGTAGGCATCGGGCAATTCTCTTCAAGAAATTGGCAGATTACATAGGTTTGCCTTGCCGTATTGCTCGTGGTTGCAAATATTGTGTTGCAGATCATAGGTCCTCTTGTCTTGTCAAGATTAAAGATGACAGGCAGCTTTCAAGGGAATATGTAGTTGATCTAGTTGGGGAACCAGGGAATGTCCATGGGCCAGATTCGTCAATTAATGGAGCATATGTCTCTTCAATACCTTCCCCAATTCAAGTATCTCATCTAAAAGAATCCCATTCACCTTACCTTGATAGCGCAGCGTGTTCTGGATTAATAAGTTCCAGTCACAGTTCTGTTGTTCCGGAAAGTGATAATCTATTTTCAGGTTATGGACAGAAAACTCAACAAGTTAAGGAAACTAGTTTGGTGAAAAGTTCTAAGAGCTCCATTTATTCTTCAGTTGATCAAACTTGTGAAAGAACAGACCCTCGTCTATTATCTTTTGGCTTGAAAGAGAGTGCTGCGGAAAGTGAAATTCTAGGTTCAATTTTGCCTTCTGTCCAGGAAGGTGTTTCTGAAGCTCTGCATCCACCCATTGAGGCATCATTACATGGACACCCCGGGCTAGGTGAAGCTACAGTTGTCGTCCAAGAAACTTTCAATGATGGGATTATTATAGCTGGGAGTTCTGTGGTAAAAAGTACTACTAAGCAATCTACAGTAAGTTCATCCAGCCAGTCAGAACTGGAACAGGTAGACAATACACTTGAAAACCGGGGCCGTTTTCCTGCTGCTACTATTCCAAGATACTTGAATCTTGAACCGTCTCTTGCAATGGATTGGCTTGAGATATCATGGGAAGATCTACGCATTAAAGAGCGTGTTGGTGCTGGCTCATTTGGAACAGTGCATCGTGCTGAATGGCATGGATCAGATGTTGCAGTCAAGGTTTTGACTGTTCAGGATTTCCAAGATGATCAGTTGAAAGAGTTTCTGAGAGAGGTTGCAATAATGAAACGTGTTCGCCATCCAAATGTGGTGCTTTTCATGGGTGCAGTCACAAAGCGTCCTCATCTATCTATAGTGACAGAATATTTGCCCAGGGGTAGTTTATACCGGCTGATACATCGGCCAGCCTCTGGTGAAATTCTGGATCAAAGGAGGCGGTTAAGGATGGCTCTTGATGTGGCTAAAGGGATCAATTATCTCCACTGTTTGAACCCTCCTATTGTGCACTGGGATCTTAAATCCCCAAACTTATTAGTGGACAAAAATTGGACTGTAAAGGTGTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTTCATATCGTCAAAATCTGTTGCTGGAACACCGGAGTGGATGGCTCCAGAGTTTCTTCGTGGAGAACCTTCAAATGAGAAGTCTGACGTCTACAGCTTTGGAGTCATCCTGTGGGAGCTTGTGACCTTGCAACAACCATGGAGTGGACTTAGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTTCAGAATCGGAAGCTTTCCGTCCCACCAAACATCTCCCCAGCGTTGGCCTCCCTCATGGAATCTTGTTGGGATGATGATCCTGCTCAACGCCCATCTTTTTCTAATATAGTCGAGTCATTAAAGAAGCTGCTAAAGTCTCCTGTTGAGATGATAAAAATGGGTGGGACAACGTA 2843 0.4552 MPHRTTYFFPRQFPERGLDESSKQVLDHEKEKIFNSIKSETFGVERDRKKPVSTTPAKDDVVSWSGKHSAVSDLFTGGDKHRTKQKQIAAFGNWLLEKKGDRSGHVKPYSDWSSCDEDRELLLPPESVPAPAPPPPETVKDTAIDRDFDRQVSLPRLSSGSSYAGSLFSGTTLDGANFSSDIKEETSSSRVSSTTRRQEEDEEEGKEKLAQKYKESYYLQLTLAKRLTCLASLTTEPVLTLDTGIETWDAEVVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNEVEEGKRLPTLVALKEVEPSETSLEVVLVDRQEDSRLKELHDKAQELYCASENTLVLVEQLGKLVAVCMGGTYPVEQGDLHKRWKMVSKRLRNFHKCVVLPIGSLSSGLCRHRAILFKKLADYIGLPCRIARGCKYCVADHRSSCLVKIKDDRQLSREYVVDLVGEPGNVHGPDSSINGAYVSSIPSPIQVSHLKESHSPYLDSAACSGLISSSHSSVVPESDNLFSGYGQKTQQVKETSLVKSSKSSIYSSVDQTCERTDPRLLSFGLKESAAESEILGSILPSVQEGVSEALHPPIEASLHGHPGLGEATVVVQETFNDGIIIAGSSVVKSTTKQSTVSSSSQSELEQVDNTLENRGRFPAATIPRYLNLEPSLAMDWLEISWEDLRIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASGEILDQRRRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTLQQPWSGLSPAQVVGAVAFQNRKLSVPPNISPALASLMESCWDDDPAQRPSFSNIVESLKKLLKSPVEMIKMGGTT 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02310 947 PRINTS Tyrosine kinase catalytic domain signature 791 809 IPR001245 GO:0004672|GO:0006468
Bva12g02310 947 PRINTS Tyrosine kinase catalytic domain signature 901 923 IPR001245 GO:0004672|GO:0006468
Bva12g02310 947 PRINTS Tyrosine kinase catalytic domain signature 750 763 IPR001245 GO:0004672|GO:0006468
Bva12g02310 947 PRINTS Tyrosine kinase catalytic domain signature 857 879 IPR001245 GO:0004672|GO:0006468
Bva12g02310 947 Gene3D Transferase(Phosphotransferase) domain 1 755 942 - -
Bva12g02310 947 SUPERFAMILY Protein kinase-like (PK-like) 654 930 IPR011009 -
Bva12g02310 947 Pfam Ethylene-responsive protein kinase Le-CTR1 250 458 - -
Bva12g02310 947 MobiDBLite consensus disorder prediction 194 209 - -
Bva12g02310 947 SMART serkin_6 676 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02310 947 MobiDBLite consensus disorder prediction 179 209 - -
Bva12g02310 947 Gene3D Phosphorylase Kinase; domain 1 669 753 - -
Bva12g02310 947 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 101 944 - -
Bva12g02310 947 CDD STKc_MAP3K-like 682 930 - -
Bva12g02310 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 797 809 IPR008271 GO:0004672|GO:0006468
Bva12g02310 947 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 101 944 - -
Bva12g02310 947 ProSitePatterns Protein kinases ATP-binding region signature. 682 703 IPR017441 GO:0005524
Bva12g02310 947 ProSiteProfiles Protein kinase domain profile. 676 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02310 947 Pfam Protein tyrosine and serine/threonine kinase 676 930 IPR001245 GO:0004672|GO:0006468
Bva12g02310 947 MobiDBLite consensus disorder prediction 179 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02310 Bva-Chr12 17535641 17542393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02310 1 945 MAP Kinase Kinase Kinase AT4G24480 59.470 0.0 1111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bva12g02310 PK_Tyr_Ser-Thr 3.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02310 - - gmx:100808435 1352.42