Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02305 ATGAGCGAAGCAGAGGATAGCTTTACAGAAACGAAGTCAGTGTTCCCAGGTTTTCTTCTCGACCCTGTAAAATGTGGCATGCTGAATTTGCaagacaaacaaaaactaGTCCATAAGATTGCTTGGCAGTCAAAAGATGCCCCAAAGATGCTTTCTTCCTTTACACGCAGGGAGCTTCTAGAAATAATCTGTGCTGAAATGGGTAAAGAGAGGAAGTACACAGGATATACTAAGACTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAGAAATCCAAGTTGAACGTCATCCAAAATACTCTTGCCGATTCTCCGGCCAAAAGTCATATTGGATCAAAAAGGAAGATGCTTCTGTCTGAAGATCTAAATCACGTTCCCCAGGGCaataataaagaagaaaatgtgaGAACATCACTGTGTCAGAATGTTGCATGTAGAGCTACTTTGAATGCAGGAGATGCTTTTTGCAAGAGATGTTCTTGCTGTATCTGTCATTCTTACGATGATAACAAGGATCCTAGTTTGTGGTTGACATGCGGATCTGATCTTCCTGATGGGAAGGATTCATGTGGAATATCATGCCATTTGCAATGTGCTTTGAGCGATGAAAGGTCTGGCATTTTGAAGAACAGTTGTGGTACCAAGTTGGATGGCAGCTTCTCCTGCGTTTtttgtggaaaaattaatggaCTAATGAGGACATGGAGAAAACAACTGTTGGTTGCCAAGGAAGCCAGAAGAGTAGATATACTGTCATTTCGAATTTCCTTGGCTCACAGAATTCTCATAGGAACTGAAGCATACAAGGAAGTACATAAGATTGTAGATACTGCAATCAAATTACTGAATAATGAAGTGGGGCCTCTGGATCAGGACTGTGCAATGATGACACGTGGCATTGTGAACAGGCTTTCATGTGGAGCTGAGGTTCAGAAGTTCTGTTCTTCTGCAGTTGAATGTTTTGATTCAATGTTTTCGAACTTCTTCCCTAACTGTGCTGAAAAGAAAGACGTACCAACATGCTCTGTACATTTTGAAGAGTGTCTTCCTACCTCAGTGGTTATTGTGCTAGAATACGAAGATCAGATTTTAAAGAACTTTCTAGGGGTCAGGCTTTGGCATCGGATGTCAACTGTGGACTACGCAGAACAGCCCACCTACATTGTATTGAGGCCAGAGAAAAGATTCAAGTTAGAAAACCTCCATCCTTCAACTCAGTATTGTTGCAAAGTTTCTCTGTTTAGCAGCACAGGGATTCTGGGCACGGCAGAAGCTAAATTGGTTACACCTCTGAACCCCACAAATTCTCTTGCAAAATCAACTAAACCTGGTAAGGATCATATCAGGCATTCAACTAGCGGATCCTCAAGAACAGCTTCAGGTGTACATGCTCAGAAGATGAACAAGATAGAAGATGAAAATCATCATCAGGTAGAATCTTCCAATTCTAACGTAAATTCTGGAGACCACCCTGCTGAACGCCCCTTTCTGGAAAACATCAGGGGCAGATTTGAAGGGTTTCTCTCCAAGCCTCCTCTGTCATTTGAAGCTCTTTCATCCAAAAACGTTGCTGCAGTTTCCCCGTCCACACCTTCTAAACCCAATGAAATGAGACAAGTTAATGGTTTGGGTTGTAGAAAGAACTCGGAAAATGACTATGAGTATTCTGTCAAAGTAGTTCGATGGTTAGAACGTGAAGGGCACATAGACGAGAACTTCAGAGTAAAGTTTCTCACTTGGTTCAGCCTTAAAGCTACTTCGCCAGAGAGAAGGGTAGTTAGTGCTTTTGTGAATACCTTCATTGATGACCTGCCAAGCTTGGCGGACCAGCTTATGCACACTTTCATGGACGAAATATGTTGCGACCGAAAATCTTA 1880 0.4101 MSEAEDSFTETKSVFPGFLLDPVKCGMLNLQDKQKLVHKIAWQSKDAPKMLSSFTRRELLEIICAEMGKERKYTGYTKTQMIEHLLKIISKKSKLNVIQNTLADSPAKSHIGSKRKMLLSEDLNHVPQGNNKEENVRTSLCQNVACRATLNAGDAFCKRCSCCICHSYDDNKDPSLWLTCGSDLPDGKDSCGISCHLQCALSDERSGILKNSCGTKLDGSFSCVFCGKINGLMRTWRKQLLVAKEARRVDILSFRISLAHRILIGTEAYKEVHKIVDTAIKLLNNEVGPLDQDCAMMTRGIVNRLSCGAEVQKFCSSAVECFDSMFSNFFPNCAEKKDVPTCSVHFEECLPTSVVIVLEYEDQILKNFLGVRLWHRMSTVDYAEQPTYIVLRPEKRFKLENLHPSTQYCCKVSLFSSTGILGTAEAKLVTPLNPTNSLAKSTKPGKDHIRHSTSGSSRTASGVHAQKMNKIEDENHHQVESSNSNVNSGDHPAERPFLENIRGRFEGFLSKPPLSFEALSSKNVAAVSPSTPSKPNEMRQVNGLGCRKNSENDYEYSVKVVRWLEREGHIDENFRVKFLTWFSLKATSPERRVVSAFVNTFIDDLPSLADQLMHTFMDEICCDRKS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02305 626 CDD PHD_VIN3_plant 161 226 - -
Bva12g02305 626 PANTHER VIN3-LIKE PROTEIN 2-RELATED 12 626 IPR044514 GO:0010048|GO:0040029
Bva12g02305 626 MobiDBLite consensus disorder prediction 435 464 - -
Bva12g02305 626 PANTHER OS08G0220600 PROTEIN 12 626 - -
Bva12g02305 626 Pfam PHD - plant homeodomain finger protein 141 261 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02305 Bva-Chr12 17520061 17524189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02305 20 626 PHD Gene Family AT5G57380 34.574 1.86e-113 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02305 - - gmx:100785502 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02305 12 17520061 17524189 Bva12g02305 12 17520061 17524189 ECH