Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02295 GTCTAATTGTTGATTGCATTGAGATCTATACTATTTGGATATCCCACTAATATACTCCAGCATTGGGATTAAAGGGTAAACTGGCTTTGATCTGCGACGTAATTCTGTGCTCATAGCATGACCTTCTGCTTCAATTCAACAATGGCTTATCCTGGTTCAATGCAATTGGCTCACGACGTTAGTGTCCACAGTAATAGTAAATGTTGTAGTTTTCATCATAATCCAAGGGGTGGTGGTCGATTACATTTGTTTACCATCAATCTCTCGCCACATAGTTTGAGGCAGGATACTTCAGCTCTTCACCATTTAAGTAAAGTTTATGCTCCAGTAAGGCCTGTACCTTCCAGAtgtaatgttttcttttgccGTTCTGCCCTGTTACCTGGTGGAGCGAGTGGGATTCCATCCATAAAATCtgctagtattttttttacaagGTCATATGATGCTGTACAGGGAAGCCCTGTTGTGCTTCAATTGATCCCAGCCCTTGGTGTCATTGCCTTTGCTGTTTGTGGTATTGAGCCACTACTACGCGTGGGCAGGGTCCTGTTTCTCCAAAGGACTGATAGCAGCTGGAAGAAAAGTAGTTCGTATTATATTATGACATCTTATTTTCAACCTTTGCTGCTGTGGACTGGGGCAATGCTTGTCTGCAGGGCTTTTGATCCAATAGTCTTACCGTCAGAAGCCAGCCAAGTTGTGAAGCAACGGGTGCTGAATTTTGTGAGATCATTATCAACGGTGCTCTCATTTGCGTACTGTGTACAAAGCTTAATTCAACAAGTACAAAAATTCTTTATGGAGACAAAAGACTCCAGTGATGCCAGAAATATGGGTTTTGACTTTGCTGGGAAAGCTGTATATACTGCCGTTTGGGTCGCTGCAGTGTCATTGTTCATGGAATTGCTAGGCTTTTCTACACAGAAGTGGTTAACTGCTGGTGGTTTGGGCACAGTGTTGCTCACCCTTGCAGGTCGTGAGATATTTACGAACTTCCTTTCAAGTATGATGATTCATGCGACTCGGCCATTTGTTGTGAATGAGTGGATTCAAACAAAGATCGACGGATATGAGGTTTCTGGTACAGTCGAGCATGTGGGGTGGTGGTCACCAACTATAGTGAGAGGTGATGATCGTGAAGCAGTTCATATTCCAAATCACAAGTTCACCGTAAATGTTGTGCGAAATCTTAGTCAGAAATCTCATTGGCGCATCAAAACTTATCTTGCTATCAGCCACTTGGATGTTAACAAGATTAACAATATTATAGCTGATATGCGCAAGGTTTTGGCAAAAAATCCTCAAGTAGAGCAACAAAAGTTGCACAGAAGGGTTTTCTTGGAGAATGTCAATCCAGATAATCAGGCTCTTATGATACTAATATCTTGCTTTGTGAAAACTTCACATTTTGAGGAGTACCTTTGCGTTAAGGAGGCAATCATCTTGGATCTTCTCAGAGTTATCAGTCATCATCGAGCCAGGCTAGCCACACCGATCCGCACAGTTCAGAAAATATACAGTGAGGCTGACGTGGAAAACATACCATTTGGTGACATTTTCACTCGTTCCAGAGCAGCAACAAATCGGCCATTCCTATTGATAGAACCATCATATAAAGTTAATGGtgaagataaatttaagaCCTCAACCCGTTCATCTCGTACAAATGAGGAAAAAGATGCCAAAATTGAGGAAACGTTGACATTTGATTCCAAAGGAGATGGGGATTTGGTGGGGACATCAACCACTACACCCAGTTCCAACTCCAAGGACAAATTGAATTCAACGTCGGAAGCGCAAACCCAGAATATGGATGCTGACAGTTCTGTACAGAAGACCTCCAAAACCTTGCAGCCCAAAAAGGAAAGTGCAGCAGAGACAGGAAAGGTAACCGCGGATCCATCCGAAAATTCCCATGAGTCTGGCAAGGTAGAGACTTCGTCTGCTATTTCACATGCAAAGCAAGATGAACAGAAATCTGCCATATCCTCATCATCAGCCAGGCCTTCCTTTGAAGAGAATATTGTTCTTGGTGTTGCTCTAGAGGGCTCAAGACGCACTCTTCCTATTGATGAAGAAATGACTCCATCTCCAATCCCTGCAGAGTCACAAGAATTTGCCGTCCAACGGAACGGGAGTGGACTTTCTTCTACTGGTAATGATAAAAGAGATGGTCACATATCTACACCTCCAGGTGTCAAACAGAGTGACTA 2216 0.4215 VLLIALRSILFGYPTNILQHWDRVNWLSATFCAHSMTFCFNSTMAYPGSMQLAHDVSVHSNSKCCSFHHNPRGGGRLHLFTINLSPHSLRQDTSALHHLSKVYAPVRPVPSRCNVFFCRSALLPGGASGIPSIKSASIFFTRSYDAVQGSPVVLQLIPALGVIAFAVCGIEPLLRVGRVLFLQRTDSSWKKSSSYYIMTSYFQPLLLWTGAMLVCRAFDPIVLPSEASQVVKQRVLNFVRSLSTVLSFAYCVQSLIQQVQKFFMETKDSSDARNMGFDFAGKAVYTAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSMMIHATRPFVVNEWIQTKIDGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKTYLAISHLDVNKINNIIADMRKVLAKNPQVEQQKLHRRVFLENVNPDNQALMILISCFVKTSHFEEYLCVKEAIILDLLRVISHHRARLATPIRTVQKIYSEADVENIPFGDIFTRSRAATNRPFLLIEPSYKVNGEDKFKTSTRSSRTNEEKDAKIEETLTFDSKGDGDLVGTSTTTPSSNSKDKLNSTSEAQTQNMDADSSVQKTSKTLQPKKESAAETGKVTADPSENSHESGKVETSSAISHAKQDEQKSAISSSSARPSFEENIVLGVALEGSRRTLPIDEEMTPSPIPAESQEFAVQRNGSGLSSTGNDKRDGHISTPPGVKQSD 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02295 734 MobiDBLite consensus disorder prediction 540 568 - -
Bva12g02295 734 MobiDBLite consensus disorder prediction 699 721 - -
Bva12g02295 734 MobiDBLite consensus disorder prediction 572 618 - -
Bva12g02295 734 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 44 726 - -
Bva12g02295 734 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 44 726 IPR045042 -
Bva12g02295 734 Gene3D - 341 396 IPR023408 -
Bva12g02295 734 Pfam Mechanosensitive ion channel 282 489 IPR006685 GO:0016020|GO:0055085
Bva12g02295 734 Gene3D - 234 339 - -
Bva12g02295 734 MobiDBLite consensus disorder prediction 627 668 - -
Bva12g02295 734 SUPERFAMILY Sm-like ribonucleoproteins 325 395 IPR010920 -
Bva12g02295 734 MobiDBLite consensus disorder prediction 540 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02295 Bva-Chr12 17458672 17464629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02295 43 705 Mechanosensitive Ion Channel Family AT1G58200 56.975 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02295 K22047 - gmx:100796022 1003.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02295 12 17458672 17464629 Bva12g02295 12 17458672 17464629 ECH