Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02285 ATGTTCTCGAAGCTTCAACACCAACACCATCCTTTCACACCCCATCCCTTCCAACTCTCTCGCGAATGCCAAACCTCCGAAGAAGACGATAGCCGCAGCAGCGGCGGCCCCATCCACAAGCCCAATTCCACCGGCGATGGAGCCACCATTGAGGTTGTCCGGCGACCCCGTGGTCGCCCACCCGGATCCAAAAACAAGCCCAGGCCAGCCGTTATTATTACCCGTGACGCCGAGCCTGCCATGAGCCCCTACATTCTCGAAGTCCCTGGTGGAAGCGATGTCGTTGAAGCGATCGCCCGGTTTAGTCGCCGCAAAAACATCGGTCTCTGTGTCCTAACTGGTTCTGGAACCGTCGCTAACGTTATGCTCCGTCAACCCTCAACTACTCCAGGTGCCACCGTTACTTTTCACGGCCGTTTCGACATCCTCTCTTTATCTGCCACCTTCGTTCCACAGCAACAAGGGGGTTCGCCGGCTGTCCCCAACGGATTCACAATCTCGCTGGCGGGCCCACAAGGCCAGATCGTGGGAGGATTGGTTGCTGGCGCTTTAATCGCAGCTGGAACCGTGTTCCTGATAGCTGCTTCGTTCAACAACCCATCGTATCACAGGTTGCCTGCTGAAGACGACGTCAGAACATCGGTGTCAGGCGGCGGAGGCGGAGATGGGCAGTCGCCTCCAGTCTCCGCAGGCGGTGTAGAAAGTGGGCAGCCACGTGCCGACTCATGCGGGACGTCCATGTACAGCTGTCACTTACCTTCGGATGTGATTTGGGCTCCAACAGCAAGGCCACCACCCTATTG 803 0.5766 MFSKLQHQHHPFTPHPFQLSRECQTSEEDDSRSSGGPIHKPNSTGDGATIEVVRRPRGRPPGSKNKPRPAVIITRDAEPAMSPYILEVPGGSDVVEAIARFSRRKNIGLCVLTGSGTVANVMLRQPSTTPGATVTFHGRFDILSLSATFVPQQQGGSPAVPNGFTISLAGPQGQIVGGLVAGALIAAGTVFLIAASFNNPSYHRLPAEDDVRTSVSGGGGGDGQSPPVSAGGVESGQPRADSCGTSMYSCHLPSDVIWAPTARPPPY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02285 267 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 209 - -
Bva12g02285 267 PIRSF ESCAROLA 1 259 IPR014476 GO:0003680
Bva12g02285 267 ProSiteProfiles PPC domain profile profile. 78 221 IPR005175 -
Bva12g02285 267 CDD DUF296 83 197 IPR005175 -
Bva12g02285 267 Gene3D - 82 215 - -
Bva12g02285 267 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 266 IPR014476 GO:0003680
Bva12g02285 267 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 199 IPR005175 -
Bva12g02285 267 MobiDBLite consensus disorder prediction 210 242 - -
Bva12g02285 267 MobiDBLite consensus disorder prediction 1 71 - -
Bva12g02285 267 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 11 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02285 Bva-Chr12 17412988 17415176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02285 44 267 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 68.966 1.55e-103 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02285 - - gmx:100788098 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02285 12 17412988 17415176 Bva12g02285 12 17412988 17415176 ECH