Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02275 ATGATGTGGTATGAGTGGAGTGACAATATTCCCGAAGCCAACCACTCCAACCAGGAAGATTCTCATCTCAATTTCGATTTTATATCTTCCCTATCAAAACCGAAGGATTATTACAAGATATTGGAAGTGGATTATGATGCCACCGACGATGCTATTCGATGCAATTACATTCGTTTAGCTCTGAAATGGCATCCGGACAAGCAGAAAGGCCAAGATTTCGCAACCTCACGTTTCCAAGAGATAAACGAGGCTTACCAAGTTTTGAGTGATCCTGTCAAAAGGAGTGAATATGACAAAAACGGGATGCTTTACGTCTATGATTACAACCTTATTGATTATCTTAATCGTTACAAGGGTCTTATATTGACTTGTAATGGTCTGGGCATAAAGCATTCTATATGGTA 404 0.3936 MMWYEWSDNIPEANHSNQEDSHLNFDFISSLSKPKDYYKILEVDYDATDDAIRCNYIRLALKWHPDKQKGQDFATSRFQEINEAYQVLSDPVKRSEYDKNGMLYVYDYNLIDYLNRYKGLILTCNGLGIKHSIW 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02275 134 Pfam DnaJ domain 36 98 IPR001623 -
Bva12g02275 134 SMART dnaj_3 35 93 IPR001623 -
Bva12g02275 134 CDD DnaJ 36 90 IPR001623 -
Bva12g02275 134 SUPERFAMILY Chaperone J-domain 31 120 IPR036869 -
Bva12g02275 134 ProSitePatterns Nt-dnaJ domain signature. 78 97 IPR018253 -
Bva12g02275 134 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 134 - -
Bva12g02275 134 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 134 - -
Bva12g02275 134 Gene3D DnaJ domain 26 111 IPR036869 -
Bva12g02275 134 PRINTS DnaJ domain signature 73 93 IPR001623 -
Bva12g02275 134 PRINTS DnaJ domain signature 93 112 IPR001623 -
Bva12g02275 134 PRINTS DnaJ domain signature 56 71 IPR001623 -
Bva12g02275 134 PRINTS DnaJ domain signature 38 56 IPR001623 -
Bva12g02275 134 ProSiteProfiles dnaJ domain profile. 36 101 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02275 Bva-Chr12 17350828 17353497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02275 29 98 C2H2 Transcription Factor Family AT1G74250 42.667 1.65e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02275 - - qsu:112005211 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02275 12 17350828 17353497 Bva12g02275 12 17350828 17353497 ECH