Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02271 ATGGCACCCAGTTTTGATTGTGTGTCAAGCCTTCTCTGTGCAGAAGACAACAGCATTTTCGATGATAACGAATATGGGGGTGTGATGGAGCAGTTCGAGGATACATGGAACCATATATATCATCGGTTCTATAATCAAAACCAGTACTTTGATGACCCATATCGCTTGCCATTGCAGAGTGATGAGTGTTTGGCGCTAATGGTAGAAAAGGAAGGCCAACACTTGCCTGGTGCCGATTACTTGAATAGGCTACGGAATGGGGATTTGGACTTTGGGGCCAGAAAGGAGGCCATTGATTGGATAGAGAAGGTTCGAGCTCATTTCGGTTTCGGAGCACTCTGTGGATATCTATCCATAAACTACTTAGATCGCTTCCTTTCTGCATATGAATTACCAAAGGGGAAAGCTTGGACAATGCAATTATTGGCCGTGGCATGCTTATCTCTGGCAGCCAAAGTAGAGGAGACTGAGGTTCCTCTGGTTGTTGATCTGCAGGTGGGTGAATCAAAGTTTGTGTTTGAAGCTAGAACAATACAAAGAATGGAGCTTGTGGTATTGAGTACCCTGAGATGGAGAATGCAGACCATTACTCCTTTTTCCTTCATAGACTATTTCCTCTGCAAGATCAACCATGATCAAATTACTCCAAGAACTTCAGTTTTGCGATCCATCCAACTTATCTTGAGTACAGCAAGAGGGATGGACTTTATGGAATTCATGCCATCAGAAATTGCAGCAGCAGTGGCAATATCTGTTGTGGGGGAAACCCAAACAGTTAACACGGAGAAAGCAGTTTCTGTTCTCATTCATCTTGTAGAAAAGGAGAGAGTCCTGAAGTGCATTAAACTGATACGCGAGTTGTCATCAAGAAGTGGCTATGCTACAAGTGCTTCTTCTGTCCTTTCTGTTCCCCAAAGCCCCATAGGGGTGTTGGATGCCGCATGCTTCAGCTATAAAAGCGACGAGACAAATGGTGGATCATGTGCTAATTCTTCACATAATAGCCCTGATGCTAAAAGGAGGAAGCTAAACAGAACCTGTGGAGTAGAGCTATCATCATA 1061 0.4392 MAPSFDCVSSLLCAEDNSIFDDNEYGGVMEQFEDTWNHIYHRFYNQNQYFDDPYRLPLQSDECLALMVEKEGQHLPGADYLNRLRNGDLDFGARKEAIDWIEKVRAHFGFGALCGYLSINYLDRFLSAYELPKGKAWTMQLLAVACLSLAAKVEETEVPLVVDLQVGESKFVFEARTIQRMELVVLSTLRWRMQTITPFSFIDYFLCKINHDQITPRTSVLRSIQLILSTARGMDFMEFMPSEIAAAVAISVVGETQTVNTEKAVSVLIHLVEKERVLKCIKLIRELSSRSGYATSASSVLSVPQSPIGVLDAACFSYKSDETNGGSCANSSHNSPDAKRRKLNRTCGVELSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02271 353 Gene3D - 66 282 - -
Bva12g02271 353 CDD CYCLIN 94 186 IPR013763 -
Bva12g02271 353 SMART Cyclin_C_2 196 304 IPR004367 -
Bva12g02271 353 SUPERFAMILY Cyclin-like 51 193 IPR036915 -
Bva12g02271 353 Gene3D - 77 194 - -
Bva12g02271 353 PANTHER CYCLINS 1 345 IPR039361 -
Bva12g02271 353 Pfam Cyclin, C-terminal domain 196 292 IPR004367 -
Bva12g02271 353 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 345 - -
Bva12g02271 353 SMART cyclin_7 99 187 IPR013763 -
Bva12g02271 353 Pfam Cyclin, N-terminal domain 64 193 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02271 Bva-Chr12 17331144 17333846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02271 41 329 Core Cell Cycle Gene Families AT2G22490 47.213 6.02e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02271 K18810 - gmx:100803873 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02271 12 17331144 17333846 Bva12g02271 12 17331144 17333846 ECH