Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02270 ATGGGGGGCGATTGTGGAAACTGGATTCCACATTTGCATTTTGATTGGCAATCACCGAATTTGAGTTCCTCTGGTGCTCGCCTTGATATGAGGAAGCAAAATGGTATTCCTGCATATATGAACCCTGGCATTAGTGTGGCGTCAGGAAATGAGAAAACGCCAGTTTATGCGTCCTCTGAGCCACCTCATTTGCAGTTAGGCCATTCTTCTAATGAACCTCATGGCTGGTTTTACTGTTTGCCTCGCTTCCGACAGGCATTTATGCCTTCTCCAAATTTAACCGTTGAGGAAAAGCTCCCTACTGGCCATGTGAAAGGTTATAAGGAGGAGGTACCTCTCAATAGAGAATCCGGCTTCCCTCAGAAGCATTTTCTTGTTATTGATCAGTCGGGCACTCAGACAACTTTCATTTATAGTTCTGGGTTTGGGAGTCCAGCTGACTGCCTTGCCTCTTGGCATTCCAAACTGCGTGGTCCTAGCAATCTTAATGGAAATGGGCCTTCTGGCAGGAGAGAGGACTTCAATAATCTAATTGGACCAACTTCTACTGATCAAGTTGATGAAAATCAGGGAACAGACGTCCAAAGCGATATGCACGAAGACACAGAAGAAATCAATGCATTGCTTTACTCTGATAGTGATGGTTACTCTACTGAGGATGATGAAGTTACTAGCACTGGGCATTCGCCTAGTACAATGACCACTCATGATAACCGAGAAGTTTTTGAGGAAAGCCCTGAAGAAGTTGCTAGTTCAGCTGGAAAATCAAAGAAGCGGAAGCTATCGGATAAGGATGATATTGACATACAACTCATGGACACCGCCAGTTCTCTGAATCTTAACAGACCCTTTGATATTGGAGATGATACGGAATCAAGATGTTCAAGCGGTAATAGTCGAGGGTCAGGCGAAATGGGTTCATTGTCAGGCAGTAAGAGGATGAGAAAGGAGAGGATACGAGATGTTCTGAGTATTCTGCAGAGCATTATTCCTGGCGGAAAAGATAAGGACCCAATTGTGCTTCTTGACGAAGCGATACGCTGCTTGAAATCCTTGAAAGTCAAGGCTAGAGAGCTCGGACTCGATGCCTTGTA 1094 0.4488 MGGDCGNWIPHLHFDWQSPNLSSSGARLDMRKQNGIPAYMNPGISVASGNEKTPVYASSEPPHLQLGHSSNEPHGWFYCLPRFRQAFMPSPNLTVEEKLPTGHVKGYKEEVPLNRESGFPQKHFLVIDQSGTQTTFIYSSGFGSPADCLASWHSKLRGPSNLNGNGPSGRREDFNNLIGPTSTDQVDENQGTDVQSDMHEDTEEINALLYSDSDGYSTEDDEVTSTGHSPSTMTTHDNREVFEESPEEVASSAGKSKKRKLSDKDDIDIQLMDTASSLNLNRPFDIGDDTESRCSSGNSRGSGEMGSLSGSKRMRKERIRDVLSILQSIIPGGKDKDPIVLLDEAIRCLKSLKVKARELGLDAL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02270 364 MobiDBLite consensus disorder prediction 212 262 - -
Bva12g02270 364 MobiDBLite consensus disorder prediction 291 306 - -
Bva12g02270 364 MobiDBLite consensus disorder prediction 159 199 - -
Bva12g02270 364 PANTHER TRANSCRIPTION FACTOR BHLH145 1 362 - -
Bva12g02270 364 PANTHER TRANSCRIPTION FACTOR BHLH145 1 362 IPR037546 -
Bva12g02270 364 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 313 359 IPR036638 GO:0046983
Bva12g02270 364 MobiDBLite consensus disorder prediction 159 192 - -
Bva12g02270 364 MobiDBLite consensus disorder prediction 220 236 - -
Bva12g02270 364 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 303 352 IPR011598 GO:0046983
Bva12g02270 364 MobiDBLite consensus disorder prediction 237 262 - -
Bva12g02270 364 MobiDBLite consensus disorder prediction 282 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02270 Bva-Chr12 17316640 17320197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02270 75 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 30.556 3.61e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02270 - - gmx:100812109 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02270 12 17316640 17320197 Bva06g02659 06 16854004 16857557 BWGD
Bva12g02270 12 17316640 17320197 Bva12g02270 12 17316640 17320197 ECH