Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02267 ATGGGCTATTTCTCTTGCAATGCCGAGTCGGCAATTGCAACCTGCGATCCCCATTATTGGgatttcaagaagaaaaatggaaccCGAAACGGCAGCAGTAGAAGAACCCATAAGTATAAGCTCCCACAGATCAGACAGTTTGAGTATTCCGACATCATCGCTGCTACAAAGGGTTTCTCGTCAGACAGCTTTCTAGGTAAAGGTAGCCATGGCAGCGTCTACAAAGCCTCTCTCGACAACGGCAAGCTCATCGCCGCCGTTAAAAAAACCACGTTCGCAAAACCATCAGCCTCAAATTTGCGCAACCACGCCGCCAACTGTAGCGGTTGTACTAACTGTACAAGCCCCGCAGAGAATGAGATCGAGATTCTCTCCAGAGTCCGAGATCCTCGCCGTTTCGTCAACCTTATTGGCTTCTGTACGGATGCCAATGACAACAAACTAATTGTGGTTGAGTACATGCCCAACGGTTCGCTCTACGATCTCTTGCACTCTTCATCCACTAGACCGCCCGGTTGGACTCGCCGATTCCGGTTCGCATTGCAACTGGCCAAAGCGGTTCAGACTCTTCACTCTTCGAACCCGCCGGTGATTCACCGCGATATAAAGTCCTCCAATGTTTTAATTGACGAGGAATGGAACGCTAGGCTGGGTGATTTTGGACTCGCTCTCAGGGGACACGTGGAGGACGTTCGTGTCAAGTGCACACCTCCCGCAGGGACATTGGGTTACCTGGATCCCAGCTATCTTGCGCCGGGGGATCTCAGTACCAAGAGCGACGTCTTCAGTTTTGGGATACTGCTGCTGGAGATAATTAGCGGCAGGAACGCCATTGACGTCAATTATAGCCCGCCCTCGGTGGTGGACTGGGCTGTGCCATTGATAAAGCATGGTGAATTTATCCGAACCTGCGACCGCCGGATTGCGATGCCATCGGACCCGGAGGCCATCCGGAAGATGGCGACGTTGGCAGCTCGGTGTGTGAGGTCGACGGCAGAGAAGCGGCCGTCCATGTCTGAGGTGGTGGAGTGCCTTAAACTGGTGAGGAAGAGGATTCATTCGTCACCAATATGGAAGAGTCTGAAGCGAAGGGTGACGCGTGTGGAGAATATGCAACCTTTGGTTAGGTGGGAAGTGTGCGATACAAGCGAGGAAGTTGCGGAAGTGAGGACAGGAGCAAAGGCGGTCAGCAGAAGGAACAGCAGGAAAGTATCGAGTGTGCCGGGTGTAGAGTGTGAGAGTGAACAAACCAATAATCACGTGGAGAGATCGAAATCAATCGGTTCTTTTAGCGAGATCAAAATGCACTCGGATTACAATTCAAATGTGGGTGGGTTTGCCAGGAGGAACGCGAAGACGGGTGTGACGGTGAAAATGCCGGCAGTGAAACTTAGTAAGTCGAGGTCTATGGGGGTTTTGGCGAGTCCATGCTTATTGCACAAACATTATAGCAGCGAGAATGCAAGAGGGGTTGTGTTTAAATTGGCCAAGCGTCATCATTCGCAGGAGATAGATATGTCCAAGTTAGAGGAGAAATTGCTTGAGAAGCCATTAGTCAAGTTGCATAGCAATCagaattttaatcatttggaATA 1595 0.4972 MGYFSCNAESAIATCDPHYWDFKKKNGTRNGSSRRTHKYKLPQIRQFEYSDIIAATKGFSSDSFLGKGSHGSVYKASLDNGKLIAAVKKTTFAKPSASNLRNHAANCSGCTNCTSPAENEIEILSRVRDPRRFVNLIGFCTDANDNKLIVVEYMPNGSLYDLLHSSSTRPPGWTRRFRFALQLAKAVQTLHSSNPPVIHRDIKSSNVLIDEEWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPSYLAPGDLSTKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIKHGEFIRTCDRRIAMPSDPEAIRKMATLAARCVRSTAEKRPSMSEVVECLKLVRKRIHSSPIWKSLKRRVTRVENMQPLVRWEVCDTSEEVAEVRTGAKAVSRRNSRKVSSVPGVECESEQTNNHVERSKSIGSFSEIKMHSDYNSNVGGFARRNAKTGVTVKMPAVKLSKSRSMGVLASPCLLHKHYSSENARGVVFKLAKRHHSQEIDMSKLEEKLLEKPLVKLHSNQNFNHLE 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02267 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Bva12g02267 531 Gene3D Transferase(Phosphotransferase) domain 1 154 365 - -
Bva12g02267 531 SUPERFAMILY Protein kinase-like (PK-like) 34 346 IPR011009 -
Bva12g02267 531 PANTHER - 1 518 - -
Bva12g02267 531 ProSitePatterns Protein kinases ATP-binding region signature. 65 89 IPR017441 GO:0005524
Bva12g02267 531 Pfam Protein tyrosine and serine/threonine kinase 63 345 IPR001245 GO:0004672|GO:0006468
Bva12g02267 531 ProSiteProfiles Protein kinase domain profile. 59 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02267 531 SMART serkin_6 59 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02267 531 PANTHER OS01G0750732 PROTEIN 1 518 - -
Bva12g02267 531 Gene3D Phosphorylase Kinase; domain 1 30 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02267 Bva-Chr12 17295098 17297797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02267 22 356 Receptor kinase-like Gene Family AT3G59420 38.938 1.59e-66 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Bva12g02267 PK_Tyr_Ser-Thr 3.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02267 - - qsu:112012757 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02267 12 17295098 17297797 Bva06g02662 06 16873426 16875244 BWGD
Bva12g02267 12 17295098 17297797 Bva12g02267 12 17295098 17297797 ECH