Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02260 ATGGCATCCAATTCGCATAGAGGAGGCTCGTTTTACGGCGATGCTGCCCCTTATCGATCCAGAGAGGGGCTTAGCACGAGACCCGTTACTGGTTCCGAGGAAATCCAATTGCGTATTGATCCCATGGATTTGGACGACGAGATCAGCGGTCTTCATGGCCAAGTTAGAAAGTTGAGAAATGTTGCTGAGGAGATTGGGACAGAAGTGAAGTATCAGAAAGATTTTCTGGAACAGCTGCAAATGACTATGATGAGGGCTCAAGCTGGGGTGAAGAATAATTTGAGAAGATTGAACAAGAGCATCATCCAAAATGGCTCAAATCATATTGTTCATGTGGTTGTTTTTGCCCGTACAACCTTCCTTTTGAATGGAActtttttgttcttctctGCAGCAAAATTTAGGATTGCAATGCATTCAAGCTGCGGCAAAAGCAAGGACAGCCaatatta 452 0.4292 MASNSHRGGSFYGDAAPYRSREGLSTRPVTGSEEIQLRIDPMDLDDEISGLHGQVRKLRNVAEEIGTEVKYQKDFLEQLQMTMMRAQAGVKNNLRRLNKSIIQNGSNHIVHVVVFARTTFLLNGTFLFFSAAKFRIAMHSSCGKSKDSQY 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02260 150 MobiDBLite consensus disorder prediction 1 30 - -
Bva12g02260 150 PANTHER GOLGI SNARE BET1-RELATED 9 122 IPR039897 GO:0015031|GO:0030173
Bva12g02260 150 CDD SNARE_Qc 43 99 - -
Bva12g02260 150 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 9 122 - -
Bva12g02260 150 SUPERFAMILY SNARE fusion complex 42 99 - -
Bva12g02260 150 Gene3D - 43 100 - -
Bva12g02260 150 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 45 100 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02260 Bva-Chr12 17260321 17262747 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02260 K08505 - gmx:100306642 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02260 12 17260321 17262747 Bva06g03073 06 19033178 19035778 BWGD
Bva12g02260 12 17260321 17262747 Bva12g02260 12 17260321 17262747 ECH