Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02235 ATGGAGAACAAAAGTGGCGCCCAAGAATATAGAGGCAAACCCATAATATGCAAagCTGCCATCTGCAGAAAAGCGGGTGAACCTCTAGTTATAGAGGAAATCCAGGTAGATCCACCAAAAGCTTGGGAGGTTCGGATCAAGATCATCTGCACATCTCTCTGCCATTCTGATGTAACCTTTTGGAAAATGGATCGATTACCATTTCCAAGGATTCTTGGCCACGAAGCTGTCGGAGTGGTGGAGAGCGTAGGCGAGCATGTGGAACAAGTTAAAGAAGGGGACTTGGTGGTGCCAGTGTTTCTTGCAAACTGTGGGGAATGCAGAGACTGCAAAAGCACGAGAAGCAACACGTGTTCCATGGGCGGAAACCAGTTGTCGAAGAGCATGCCTAGAGATGGAAGCAGCAGATTTAGGGACATGAAAGGAGAGGTGCTGCACCATTCCTTTCGTGTTTCCAGCTTCAGCGAGTACACCGTCGTGGATGTGATTCATGTAGTCAAAATCACCCGCGACATTCCCTTTGATAAAGCTTGCTTGCTCAGTTGCGGAGTTTCAACAGGGGTGGGAGCGGCATGGAAGGTGGCAGACGTGGACCAAGGGTCCACCGTGGCTATATTTGGGCTTGGAGCAGTAGGCCTAGCGGTTGCGGTGGGAGCAAAGCAACGAGGAGCCTCAAAGATCATAGGCGTTGATTTAAATcctgaaaaatttaaaatagGAAAAAAATTTGGGGTGACTGATTTTGTGAATCCAGATACTTGTAAGGAGAAGCCCGCGAGCGAGGTGATAAAGGAAATGACAAACGGAGGTGCTGATTATTGCTTTGAGTGCATAGGCCTGGCATCGTCAATGGCCGAAGCTTTTAATTCTAGCCGAGAGGGCTGGGGGAAAACGGTGATATTAGGGATTGAAATGCATGGTTCATCGGTAACTCTGAATCCCTATCACTTGATGAGAGGAAGAACTATAATGGGATCACTATTTGGAGGCATCAAACCCAAATCTGATATTCCCTTTCTTGTTAACAAGTATTTAGACAAAGAGATTTGCTTGGACGACTTCGTATCACGTGAGCTGGGCTTTAAAGACATAAACAAAGCTTTTGATCATCTCCTTGCAGGAAACGGCCTCCGCTGCATTATATGGATGGATAAGTA 1157 0.4624 MENKSGAQEYRGKPIICKAAICRKAGEPLVIEEIQVDPPKAWEVRIKIICTSLCHSDVTFWKMDRLPFPRILGHEAVGVVESVGEHVEQVKEGDLVVPVFLANCGECRDCKSTRSNTCSMGGNQLSKSMPRDGSSRFRDMKGEVLHHSFRVSSFSEYTVVDVIHVVKITRDIPFDKACLLSCGVSTGVGAAWKVADVDQGSTVAIFGLGAVGLAVAVGAKQRGASKIIGVDLNPEKFKIGKKFGVTDFVNPDTCKEKPASEVIKEMTNGGADYCFECIGLASSMAEAFNSSREGWGKTVILGIEMHGSSVTLNPYHLMRGRTIMGSLFGGIKPKSDIPFLVNKYLDKEICLDDFVSRELGFKDINKAFDHLLAGNGLRCIIWMDK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02235 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 172 346 IPR036291 -
Bva12g02235 385 Pfam Zinc-binding dehydrogenase 210 330 IPR013149 -
Bva12g02235 385 Gene3D - 187 326 - -
Bva12g02235 385 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Bva12g02235 385 Pfam Alcohol dehydrogenase GroES-like domain 43 167 IPR013154 -
Bva12g02235 385 PANTHER ALCOHOL DEHYDROGENASE 8 383 - -
Bva12g02235 385 PANTHER ALCOHOL DEHYDROGENASE-LIKE 2 8 383 - -
Bva12g02235 385 Gene3D - 21 379 - -
Bva12g02235 385 SUPERFAMILY GroES-like 11 193 IPR011032 -
Bva12g02235 385 SUPERFAMILY GroES-like 334 382 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02235 Bva-Chr12 17133693 17136327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02235 43 371 Monolignol Biosynthesis Gene Families AT2G21730 25.740 2.80e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02235 K00121 - zju:107420743 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02235 12 17133693 17136327 Bva12g02235 12 17133693 17136327 ECH