Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02193 ATGACTAACCAGAATGCGGTGGCACCTGATGCTGAAACACGTATAGACGAGTTGATTTCGGTGGCTATGTCCATATCGAACTCATCCCTGTTGCATGGCGCGGCAGTGCCAGAATCTATGGCAGTTCTGGGTGCGTTTCTGGGGATACCCCAGAGAAAGCTCATGAAAAGGATTGAGGATGGAGGAGGAAAGGGTGGGGCAAAAGTTCATGCCTTGATTGATTCAATGAGAGCTTGCTCTCCCCCCCGAATAAAATCCACGATCCCAATTCCAGAAAACCAAGAGAAAAGTTCATGGATTCTTCATCATCCGTCCGCTCTGGACAAGTTTGAGCAGATAATATGTCAATCAAAAGGGAAGCAGATTGTAGCCTTTCTAGACTATGATGGAACTCTCTCCCCAATCGTTCCAGACCCAGATAAAGCATTTATGACCAAAAagATGAGGGCGACGGTGAAGGACATAGCGAGAAACTTCCCTACAGCCATCGTGAGCGGGAGGTGCAGGGACAAGgtatataattttgtaaaactgCCAGAGCTTTACTATGCCGGTAGTCATGGCATGGATATAAAGGGACCTTCAAGAAGGGGACATTCCGAGAAAGGTAATCAAATCTTGTGCCAACCGGCGAGTAAATTCCTTCCCATGATTAACGAGGTGTACAAAATCTTGTTGGAAAAAACGAAGTCTGTCCCAGGGGCAAAGGTAGAAAACAACAAGTTCTGCTTGTCCGTGCACTTCCGTTGTGTTGACGAAAAGAGTTGGGATGCTTTGGCAGAAGAAGTGAGAGTGGTGCTCAATGAGTACCCTAAACTCAGGGTAACCCAAGGGAGGAAGGTACTCGAGATCCGTCCCACCATAAAATGGGACAAGGGCAAAGCTCTCGAGTTCTTGTTAGAGTCATTAGGATATGCAAATTCCAAACACGTATTTCCCATCTACATCGGTGATGACCGGACAGACGAGGACGCGTTTAAGGTCTTAAGCAGTAGGGGTCAAGGGATTGGGATTCTTGTTTCCAGAGTTCCAAAAGAAACCGACGCTTCCTACACTCTGCAAGACCCATCAGAGgcaaAGCAGTTTTTGCGGCGATTGGTGGAGTGGAAGAGAAAGACTAGTCCACTCCAACAACAGTGGAGCATTGTAGATTGTAGATG 1160 0.4629 MTNQNAVAPDAETRIDELISVAMSISNSSLLHGAAVPESMAVLGAFLGIPQRKLMKRIEDGGGKGGAKVHALIDSMRACSPPRIKSTIPIPENQEKSSWILHHPSALDKFEQIICQSKGKQIVAFLDYDGTLSPIVPDPDKAFMTKKMRATVKDIARNFPTAIVSGRCRDKVYNFVKLPELYYAGSHGMDIKGPSRRGHSEKGNQILCQPASKFLPMINEVYKILLEKTKSVPGAKVENNKFCLSVHFRCVDEKSWDALAEEVRVVLNEYPKLRVTQGRKVLEIRPTIKWDKGKALEFLLESLGYANSKHVFPIYIGDDRTDEDAFKVLSSRGQGIGILVSRVPKETDASYTLQDPSEAKQFLRRLVEWKRKTSPLQQQWSIVDCR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02193 386 Gene3D - 125 353 IPR023214 -
Bva12g02193 386 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 17 375 - -
Bva12g02193 386 Pfam Trehalose-phosphatase 125 357 IPR003337 GO:0003824|GO:0005992
Bva12g02193 386 Gene3D - 211 287 - -
Bva12g02193 386 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 17 375 IPR044651 GO:0004805|GO:0005992
Bva12g02193 386 TIGRFAM T6PP: trehalose-phosphatase 120 367 IPR003337 GO:0003824|GO:0005992
Bva12g02193 386 CDD HAD_TPP 125 358 - -
Bva12g02193 386 SUPERFAMILY HAD-like 125 370 IPR036412 -
Bva12g02193 386 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 124 330 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02193 Bva-Chr12 16904190 16906630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02193 118 363 Trehalose Biosynthesis Gene Families AT1G70290 28.627 7.55e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02193 K01087 - gmx:100788641 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02193 12 16904190 16906630 Bva06g02739 06 17229669 17231957 BWGD