Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02177 ATGGGCTCGTTGCCTACTCAAACTTCCAGCATGACAGAGCAGAGCCACCTTCACCTTGAGGATACTGGTATAACTGAGAGGTCGCAGTGGCTGTTAAGTTCTCCTAAGCCACCAGCTCTGTGGATTAAGctttttaattcaatcaagGAGACTATATTGCCTCGCCGCAACAGGAAGGAAATTTTCCACACACGTGCTGTTTCATTCTTGCATAATTTATTTCCAATTCTTAGTTGGTTCAGAAACTACAAAGCCTCCAAGTTTAAAGATGATCTATTAGCTGGTTTAACACTTGCAAGCCTTAGCATACCTCAGAGCATAGGATATGCTAATTTAGCAAAACTTGATCCACAATATGGCTTGTATACCAGTGTCGTTCCTCCTCTTATTTATGCTGTCATGGGGAGCTCCAGAGAAATTGCAATTGGACCTGTGGCTGTTGTATCCTTGCTGCTATCCTCCACAATCCAGAAGGTGATAGATCCTGCTGCTAACCCTGAAGCTTACAGAAATTTTGTCTTCACGGTGACCTTCTTTGCCGGAATCTTTCAAGCTGCATTTGGAATCTTCAGGTTGGGTTTTCTTGTCGATTTCCTTTCACATGCCGCTTTAGTTGGATTCATGGCAGGTGCAGCTATCATTATTGGTCTTCAGCAACTAAAAGGATTTCTGGGAATTAATCACTTCACCACCAAAACTGATGCAGTATCTGTTTTGGAGTCTGTTTATAAGTCACTCCATCAGCAAGTTACTTCAGGAGAGAAATGGTACCCTCTCAATTTTGTTCTGGGGTGTTCATTCCTGATTTTCCTTCTGGCTGCTCGATATATAGGCAGAAGAAACAGAAAGCTTTTCTGGTTTCCAGCTATAGCTCCTCTTGTATCGGTTTTTCTATCAACTTTCATAGTATATTTGTCAAGAGCTGATAAGCATGGGGTCAATATAATAAAGCATGTCAAAGGAGGCCTGAATCCTAGTTCAGTTCACCAGCTACGGTTCCATGATGGGAATGTGGGACAAGCAGCTAAAATTGGATTACTTTCTGCCATCATTGCTCTCACAGAAGCAATAGCCGTTGGCCGATCTTTTGCTTCTATCAAAGGATACCATCTTGATGGGAACAAGGAAATGTTAGCAATGGGCTGCATGAACATTGTGGGATCTCTAACTTCATGCTATCTGGCAACTGGCTCTTTCTCAAGGACTGCAGTAAATTTCAGCGCAGGATGTCAATCAACGATATCAAATATTGTGATGGCCATTACTGTGTTTGTGTCACTGGAATTATTAACAAGGCTTTTGTACTTCACTCCTGTGGCTATTCTTGCTTCAATCATCCTCTCTGCACTTCCTGGACTTATTGACATAAGTGAAGCTCGTTATATCTGGAAAGTTGACAAATTAGACTTTCTTGCCTGTATTGGTGCTTTCCTTGGCGTTTTGTTTGCATCAGTGGAGATTGGTCTTCTTGTTGCAGTGACAATCTCATTTGCAAAGATACTGCTCCAATCAATCCGACCTGGAGTAGAACTCCTTGGTAGACTGCCAAGAACAGAAACTTTTTGTGACATTAGTCAATATCCCATGGCCATAAGCACTCCAGGCATCTTGGTTATTCGGATAAGCTCTGGCTCACTCTGCTTTGCAAATTCCAATTTTGTCCGTGAAAGAATACTCAAGTGGGTCTCTAAAGAAGATGATGATCTCAGAGAAACTGCCAAGGGAAGGATGCAAGCAGCAATCCTAGACATGACCAACCTGATGAATGTTGATACTTCTGGAATTCTTGCGCTGGAGGAGCTGCACAAGAGATTGCTTTCGCGTGGCatacaaTTAGCTATGGTCAATCCAAGATGGGTAGTAATTTACAAGCTTAAGCTGGCACACTTTGTGGATAAAATCGGAGGACAATGGCTTTTCCTTACTGTTGCTGAAGCAGTCGACGCATGTCTTACTTCTAAAGTTGCCACCCCTTG 1976 0.4226 MGSLPTQTSSMTEQSHLHLEDTGITERSQWLLSSPKPPALWIKLFNSIKETILPRRNRKEIFHTRAVSFLHNLFPILSWFRNYKASKFKDDLLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSTIQKVIDPAANPEAYRNFVFTVTFFAGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGFLGINHFTTKTDAVSVLESVYKSLHQQVTSGEKWYPLNFVLGCSFLIFLLAARYIGRRNRKLFWFPAIAPLVSVFLSTFIVYLSRADKHGVNIIKHVKGGLNPSSVHQLRFHDGNVGQAAKIGLLSAIIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIVGSLTSCYLATGSFSRTAVNFSAGCQSTISNIVMAITVFVSLELLTRLLYFTPVAILASIILSALPGLIDISEARYIWKVDKLDFLACIGAFLGVLFASVEIGLLVAVTISFAKILLQSIRPGVELLGRLPRTETFCDISQYPMAISTPGILVIRISSGSLCFANSNFVRERILKWVSKEDDDLRETAKGRMQAAILDMTNLMNVDTSGILALEELHKRLLSRGIQLAMVNPRWVVIYKLKLAHFVDKIGGQWLFLTVAEAVDACLTSKVATP 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02177 658 ProSitePatterns SLC26A transporters signature. 117 138 IPR018045 GO:0008271|GO:0008272
Bva12g02177 658 TIGRFAM sulP: sulfate permease 75 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bva12g02177 658 PANTHER SULFATE TRANSPORTER 24 656 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bva12g02177 658 Pfam Sulfate permease family 88 474 IPR011547 GO:0016021
Bva12g02177 658 PANTHER SLC26A/SULP TRANSPORTER-RELATED 24 656 - -
Bva12g02177 658 CDD STAS_SulP_like_sulfate_transporter 527 643 - -
Bva12g02177 658 SUPERFAMILY SpoIIaa-like 532 650 IPR036513 -
Bva12g02177 658 Gene3D STAS domain 506 654 IPR036513 -
Bva12g02177 658 ProSiteProfiles STAS domain profile. 543 650 IPR002645 -
Bva12g02177 658 Pfam STAS domain 527 646 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02177 Bva-Chr12 16793534 16797617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02177 26 655 Inorganic Solute Cotransporters AT5G10180 63.736 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02177 K17469 - gmx:100805269 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02177 12 16793534 16797617 Bva06g02753 06 17329675 17333387 BWGD
Bva12g02177 12 16793534 16797617 Bva12g02177 12 16793534 16797617 ECH