Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02174 ATGTTCTCTCCGTCGGGCCGTGTTAGCCACTTTTCCGGCAGAAGAAGGATCGAGGATGTTTTTACGCGTTACATTGATCTTCCAAACCAACAGAGAGATAATTCTGCACAGTATCCCCTTGAACAGCAGCTACCTCATACTCATCGTAGGGACATTCAGAACAAGGAGTGTTTGCGTAGTACCCTACAACAACTGAGGAGTGAAAATGATATTGCTCTTCAACTTGCCAAtccGGGAGACATTAACTCTGAGATTGAGGAACTACAACAGGAAGTTATCAGGTTACACCAACAACTTCAAATAACCGAGGAACAGATAAGGGCATATGAAGCGGATCCATTAAAGATGACATCTATAGGAGAGCTCGAATCCTGCGAGAAGCATCTTCTAGATACCTTGACTCACGTCGTGCAGAGAAAGGAATACCTGTTGAGTAATCATATATCTTCGTATGATCCATCTGGTATACagGGGATGCCAACCTCTTTCGAGAATGTAGGTTGGTTGCCGGAAGGTGGCCAGAACCATCCCCAAATTTTTGATGCATCTGCTCCTAATTTGGATCATCACCTCAGaGATTTGTCGTCTGCCGTCTACGATCCATTTTCATCACAAGGAACAAGTTCGAATGCCGAGCCACAGAGTATGGTAGAGTGTCAAGTGACAAATCCAACAGACGGAAACCTTCAAGCATGGCCTCAAGGATACACGTCCTTGTATACTCCTCCCATTCAGCACGATATGGTGGGTCCCGACATGCCAGATATGTTGCCACATGGGCAGGTTAACATCCCAATCAATAATGAGGCTGCAGAGTATGAATGCAAACCACACATATCCAATGACATGATCAATTCTTA 860 0.4453 MFSPSGRVSHFSGRRRIEDVFTRYIDLPNQQRDNSAQYPLEQQLPHTHRRDIQNKECLRSTLQQLRSENDIALQLANPGDINSEIEELQQEVIRLHQQLQITEEQIRAYEADPLKMTSIGELESCEKHLLDTLTHVVQRKEYLLSNHISSYDPSGIQGMPTSFENVGWLPEGGQNHPQIFDASAPNLDHHLRDLSSAVYDPFSSQGTSSNAEPQSMVECQVTNPTDGNLQAWPQGYTSLYTPPIQHDMVGPDMPDMLPHGQVNIPINNEAAEYECKPHISNDMINS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02174 286 Pfam K-box region 84 150 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva12g02174 286 Coils Coil 85 112 - -
Bva12g02174 286 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL104 1 238 - -
Bva12g02174 286 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02174 Bva-Chr12 16780242 16783808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02174 1 281 Type I MADS-box Gene Family AT1G22130 48.649 5.40e-84 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02174 - - gmx:100305913 392.504