Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02162 ATGAATCAGCAACATCATGTTAACAACAACCAATTGCAACAATCAAATTTGGGGGGAACCACCCTTGATGATTTCCTAGTTCGTGCCAGTTTCGTGGGTAATCAAGATAATAATAGTACTGTCCCTGATGCTCATCCCCATTTGACAATTGACCCAAGGGTTATGTCACAGAGGGCAGAGTGGTTGCCACTGCAAATGATAATGCCCAACATTAACcaacagcaacagcagcagcaaatGAGAGGGCTATCTTCAGATTTCAGCAGTGTTTCTAAATCTGAACACGAGATTGAGAAGCCAGTTGTGGAAATTGGTTACTCGGAGAATCCATTAGCCATTCCGATGCCAATGCCTACAATGTTATCATCTTCTTCTGATTCTCAGGCAGCAGCTGCTAATGAAAAGAAGAGACGCTACACGGATGAGTTGATGGAAAAAAGCATTGAAAGGAGGCAGAAGAGGATGATCAAGAATAGGGAATCGGCTGCCAGATCAAGGGCCAAGAAGCAGGCCTATACAAATGAATTAGAGGATAAAAAGTTCCGGTTGCAGAAGACAAATAACTGGCTCAAAAAGCTAAAGGAAGTGGATGCGCAGTTATTTTCAGTTAgagcttccctgccaaggtaCCAACTACGGCGTACCAGTTCTGCTACATTCTA 662 0.4018 MNQQHHVNNNQLQQSNLGGTTLDDFLVRASFVGNQDNNSTVPDAHPHLTIDPRVMSQRAEWLPLQMIMPNINQQQQQQQMRGLSSDFSSVSKSEHEIEKPVVEIGYSENPLAIPMPMPTMLSSSSDSQAAAANEKKRRYTDELMEKSIERRQKRMIKNRESAARSRAKKQAYTNELEDKKFRLQKTNNWLKKLKEVDAQLFSVRASLPRYQLRRTSSATF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02162 220 SUPERFAMILY Leucine zipper domain 150 192 IPR046347 GO:0003700|GO:0006355
Bva12g02162 220 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 148 192 IPR004827 GO:0003700|GO:0006355
Bva12g02162 220 Pfam bZIP transcription factor 150 192 IPR004827 GO:0003700|GO:0006355
Bva12g02162 220 SMART brlzneu 146 209 IPR004827 GO:0003700|GO:0006355
Bva12g02162 220 Gene3D - 148 200 - -
Bva12g02162 220 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 4 213 IPR043452 GO:0003700|GO:0045893
Bva12g02162 220 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 153 168 IPR004827 GO:0003700|GO:0006355
Bva12g02162 220 CDD bZIP_plant_BZIP46 150 195 - -
Bva12g02162 220 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 3 4 213 - -
Bva12g02162 220 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02162 Bva-Chr12 16723005 16724135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02162 119 220 bZIP Transcription Factor Family AT3G56850 55.882 1.35e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva12g02162 bZIP_1 1.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02162 K14432 - rcu:8263004 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02162 12 16723005 16724135 Bva12g02162 12 16723005 16724135 ECH