Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02151 ATGCTTTGGTGGTTTTGTACCTTGTTGTTGCCGCTGATGACCGGGGGCCGATGTTACCGGCAGAAGGAGGAGACTGGTGTGGGTGGGGAAGGAGGTTGCGGTGCCGAGGAGATGCCTTGCCCAGTTTCAAGGGTTCCGGCGAAAACTCCGGTGACCCAACCCGAAAATCCTGAGAGCTCGACTGGTCCTCAAATCGATTATTACTCACAGGCTAGGAAAGCACTCAGTGAGCGTTCGCCTTTTGATGTTGCTGAAGAGACTTCGACTTCGAGTGTTCTCACTCTGCCTAATGGTTTGGCGAACTTCTTGAACCGGCGTTCTGATAGTCGGAGACGCCACAAGAAGTCTCATTCTGGTGCAGACAGGAAATCATCTAGAGCAGGCGAGAAGTCACGTGGTTCCAACATTTGGATTGAAACAGAAGACTACTTTAGAAGCATTACATTGCCCGATATTGACTCGTTGTTGGAGGCAGCATCATCTTGTAATTTAGCTACTCGTAATTGTTTTTACATTCCAGTATTAGGAAATGCTCTGAGGCCCAATATAAGTAGTATTAAGAATGAAGAAGAGACTGATGAAAAGGTAGATAGCGTGGCTATGAAAAATGGGGAAGGTTTGTTGGAAACGCACAGTGTTGCACCTGGTATTTTGACTCCGGATGATAAGGATGCCGCTACGTCTCATTTTTCTAATAGTTTAGAGTGGCTTTTAGGTTGTAGGAATAAGGTCTCTTTAACTTCAGAGCGCCCttcaaagaaaaggaagcttCTAGGTGGTGATGCTGGGTTGGAGAAAGTTCTAATTGCCAGTCCTTGTGACGGGGACTCATCCTTTTGCCATTACTGTAGTAGGGGAGACGCCAGCAGAGAGTCCAATCGTTTAATTATCTGTGCTTCTTGTAAAGTTGCAGTTCACCAGAAGTGCTATGGTGTGAAAGACAATGTGGATGGGTCTTGGTTGTGCTCCTGGTGTAAACGGAAGGACAACACTGGTGAATCAGTGAATTCTTGTGTGCTTTGCCCCAAGAAGGGTGGTGCTTTAAAAGCTGTCAGTGGAAATGGGGAAAATGTTGGGTCTGTAGAGTTCGCTCACCTGTTTTGTTGTCTGTGGTTGCCTGAGGTTTATATAGAGGACTTGAAGAAGATGGAACCTATTATGAATGTGAGAGGAATCAAGGAAACCCGGAACAAATTAGTATGTCATGTATGCAAGGTGAAGTGTGGTGCTTCTGTACGGTGTAGCCATGGGACCTGCAGGACTTCCTTTCATCCTATCTGTGCACGGGAAGCTAGGCACAGGATGGAGGTTTGGGCAAAATATGGTTATGACAATGTTGAGTTGCGAGCTTTTTGCTCCAAGCACTCGGAATTACTAGAGAACAACCACATCTTGCCATCAGGAGGTTCTGTAGCTGTTGGCGTTGAATCCTCTGCTGCCAATGTAAGGTTGTCAGATGGTAGGTTAAATGCTGGTGACATGTTGGGATCTGGTGGTGTGCAGCAACTAAATAATACTGGGATGGTGCGGAGAACTGATGAGGATGTTAATGCATCTGACTCCCTTAGTTTTGCACTTGTTTTAAAGAAGTTGATTGATCGAGGAAAAGTTGATGCAAAAGCTGTAGCTTTGGACATCGGCGTTTCACCTGATACATTAGCTGCAAAACTCAATGATGCTTGCATGGCTCCAGATCTACGACGGAAAATAGTCCATTGGCTGAAAGCTCATGTCTATACTAATGCATTTCCGAAAAGTTCCAGACTGAAATTAAAACGAACTAATTCATCCAAGGATGAAAGTGGAGCTATTGATGGTTCTGATACTTTATCATTATCAGATTCAGATCTGCTGGATCCTGTTGCTGTTAAGTCGGTGCCACCAAGGAGAAGAACCATTGGCAACATTAGGATTTTGAAGGATAATAAAGTGTTAAGTTCATCTGAGGCCATTTCTAGTGAGAATAGAATGGCAATGGAGGTAGAGCAGCTTGACCAAGAAAATTCAGGACATTCTGATGAAGCATCTATTCCAGAAGCAACTGAAGTGAATTTAACCAAGTCAGAGGATACTTTTCTTGAAGGTCAAGTTATTGCAGATAAACCCTACAAAAGCAGCTTTTCACGCTCTATTCCTGAAGAGAACTTTGCTGTGTGTTGGCAGAATGCTTCTGTGTTTGAAGATCAGCTTTGTCCCGTTCATTCTGCAATGGAATCACTTCCTCCCGGTTTCATaaagaaagaagcaacTTCTAGTTATATTCACCCATACATTGGCAAGAAGTTGCAGATTCATAATTGTATGGTGTCAAAGGACAATATATGTCCAGTAGAGGAGGGAAGTTCTGGTTTGAATGAATCCCCAAAAGCTAGTGGTTGCTTGGGTTACCAAAATCAGCAGTCAACTTGCAGTGACATTTGCAAGCCTAAGCAAGAATATATGGAGCATTTGGTAAAAATGGAAGTTCCCGAATCTTCTCCAGAAGATGAAGTGGAGGGAGAACTTATATATGTTCAACATAGGCTATTGCAGAATTCAGTTGCTAGAAAGCAAATTGCTgATAACTTAATCTACAATGTAGCCAAGAGTTTACCTCAGGAGATTGATGTATCATATCAGCAACGATGGGACGCAGTGCTTGTTAACCAGTATCTATGTAATCTGAGGGAGGCAAAAAAACGAGGCAGGAAAGAGAGAAGGCATAAGGAAGCACAAGCTGTACTAGCTGCTGCAACTGCTGCCGCCGCAGCTTCTTCCAGGGTGTCTTCATTCCGGAAAGATACCTTAGATGAATCTAGACAACAGAGTTCAAGTGGGAGGACTGGTGTTTATGCTCAGCCAATGCCACGAGCCAAAGAGATGCTTCCAAGAGTTGCTGTGGCAAGGACTTCTTCAGAAAAATATTCAGATTTTGGTCATCAAACCTCTGATATTTCTAAGGAGCATTCTAGATCTTGTGATATCTGCAGACGATCTGAGACTACATTAAATCCTATCCTTGTTTGCTCTGGTTGCAAGGTTGCAGTTCACTTGGATTGCTATCGTAGTGTGAAAGAAACAATGGGTCCATGGTATTGTGAATTATGTGAAGATTTGTCATCTAGAAGCTCTGGCGCTCCTGCTGTCAATTTCTGGGAGAAGCCTTATTTTGTTGCAGAATGTGGTCTATGTGGTGGTAGTACTGGTGCTTTTAGGAAGTCTTCTGATGGTCATTGGGTCCATGCCTTTTGTGCCGAGTGGGTTTTTGAGTCTACATTCCGAAGAGGACAAGTAAATGCTGTTGAAGGAATGGAGACTGTGTTGAAGGGAGTTAGTACATGTTGCATCTGCCAACGTAAGCATGGTATATGTTTAAAGTGTAGCTATGGCCATTGTCAGACACCATTCCATCCATCCTGTGCTAGAAGTGCTGGTTTTTACATGATTGCAAGGATTGCTGGTGGCAAGCTGCAGCACAAGGCTTACTGTGAAAAGCATGGCTTGGAGCAGAGGGCAAAGGCTGAAAGTCAAAAGCATGGAATTGAGGAATTAAAAAGCATCAAGCAAACTAGGGTTGAGTTAGAGAGACTGCGTCTCCTTTGCGAAAGAATTGTCAAGCGTGAGAAAATAAAGCGGGAATTGGTTTTATGCTCACACGACATACTTGCCTTGAGAAGAGATCATGTTGCTAGGTCTGTGCTGGTCAATAGCCCGTTCTTCCTTCCTGATGGCAGCTCAGAATCAGCTACAACATCCCTGAAAGGGAATACGGAAGGATACAGATCATGCAGTGAAGCGGTCCAAAGATCGGATGATGTAACTGTGGACAGTTTGGTGTCTGGCAAGCACGGAGTTAGATTAGCTGTATCTATGGACACCGACCCAAAATTGGATGATGACTGCTCAACCTCACAAAGCCATTATAACCATAGGATTCCGGAGAGGATGCAATTTTCGGGCAAGCAGATTCCTCATAGAGCTACTGTCTCATCATCTAATCTTTTGGATGAAAGTGGATGGAGATCGAAATCAAGAAAGCATGAGGAGACATTTGAGAAAGAGCTTGTCATGACGTCAGACGAAGcatctatgaaaaatttaatgttaccTAAAGGATATGCGTATGTACCTGCTGACTGCCTGTCAAATGACAAGCAACATGATCTGGATGTATATGCTAGTGGACCATTGGAACATGATGGGTA 4184 0.4338 MLWWFCTLLLPLMTGGRCYRQKEETGVGGEGGCGAEEMPCPVSRVPAKTPVTQPENPESSTGPQIDYYSQARKALSERSPFDVAEETSTSSVLTLPNGLANFLNRRSDSRRRHKKSHSGADRKSSRAGEKSRGSNIWIETEDYFRSITLPDIDSLLEAASSCNLATRNCFYIPVLGNALRPNISSIKNEEETDEKVDSVAMKNGEGLLETHSVAPGILTPDDKDAATSHFSNSLEWLLGCRNKVSLTSERPSKKRKLLGGDAGLEKVLIASPCDGDSSFCHYCSRGDASRESNRLIICASCKVAVHQKCYGVKDNVDGSWLCSWCKRKDNTGESVNSCVLCPKKGGALKAVSGNGENVGSVEFAHLFCCLWLPEVYIEDLKKMEPIMNVRGIKETRNKLVCHVCKVKCGASVRCSHGTCRTSFHPICAREARHRMEVWAKYGYDNVELRAFCSKHSELLENNHILPSGGSVAVGVESSAANVRLSDGRLNAGDMLGSGGVQQLNNTGMVRRTDEDVNASDSLSFALVLKKLIDRGKVDAKAVALDIGVSPDTLAAKLNDACMAPDLRRKIVHWLKAHVYTNAFPKSSRLKLKRTNSSKDESGAIDGSDTLSLSDSDLLDPVAVKSVPPRRRTIGNIRILKDNKVLSSSEAISSENRMAMEVEQLDQENSGHSDEASIPEATEVNLTKSEDTFLEGQVIADKPYKSSFSRSIPEENFAVCWQNASVFEDQLCPVHSAMESLPPGFIKKEATSSYIHPYIGKKLQIHNCMVSKDNICPVEEGSSGLNESPKASGCLGYQNQQSTCSDICKPKQEYMEHLVKMEVPESSPEDEVEGELIYVQHRLLQNSVARKQIADNLIYNVAKSLPQEIDVSYQQRWDAVLVNQYLCNLREAKKRGRKERRHKEAQAVLAAATAAAAASSRVSSFRKDTLDESRQQSSSGRTGVYAQPMPRAKEMLPRVAVARTSSEKYSDFGHQTSDISKEHSRSCDICRRSETTLNPILVCSGCKVAVHLDCYRSVKETMGPWYCELCEDLSSRSSGAPAVNFWEKPYFVAECGLCGGSTGAFRKSSDGHWVHAFCAEWVFESTFRRGQVNAVEGMETVLKGVSTCCICQRKHGICLKCSYGHCQTPFHPSCARSAGFYMIARIAGGKLQHKAYCEKHGLEQRAKAESQKHGIEELKSIKQTRVELERLRLLCERIVKREKIKRELVLCSHDILALRRDHVARSVLVNSPFFLPDGSSESATTSLKGNTEGYRSCSEAVQRSDDVTVDSLVSGKHGVRLAVSMDTDPKLDDDCSTSQSHYNHRIPERMQFSGKQIPHRATVSSSNLLDESGWRSKSRKHEETFEKELVMTSDEASMKNLMLPKGYAYVPADCLSNDKQHDLDVYASGPLEHDG 1394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02151 1394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 331 IPR013083 -
Bva12g02151 1394 Pfam PHD-zinc-finger like domain 337 455 - -
Bva12g02151 1394 Pfam PHD-zinc-finger like domain 1053 1159 - -
Bva12g02151 1394 ProSitePatterns Zinc finger PHD-type signature. 280 325 IPR019786 -
Bva12g02151 1394 PANTHER PHD FINGER PROTEINS 230 490 - -
Bva12g02151 1394 PANTHER PHD FINGER PROTEINS 821 1384 - -
Bva12g02151 1394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 332 458 IPR013083 -
Bva12g02151 1394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1051 1161 IPR013083 -
Bva12g02151 1394 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 821 1384 - -
Bva12g02151 1394 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 230 490 - -
Bva12g02151 1394 MobiDBLite consensus disorder prediction 1319 1339 - -
Bva12g02151 1394 MobiDBLite consensus disorder prediction 24 65 - -
Bva12g02151 1394 SMART PHD_3 985 1030 IPR001965 -
Bva12g02151 1394 SMART PHD_3 400 456 IPR001965 -
Bva12g02151 1394 SMART PHD_3 1106 1160 IPR001965 -
Bva12g02151 1394 SMART PHD_3 279 326 IPR001965 -
Bva12g02151 1394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 961 1038 IPR013083 -
Bva12g02151 1394 ProSiteProfiles Extended PHD (ePHD) domain profile. 335 456 IPR034732 -
Bva12g02151 1394 ProSiteProfiles Zinc finger PHD-type profile. 983 1032 IPR019787 -
Bva12g02151 1394 MobiDBLite consensus disorder prediction 103 132 - -
Bva12g02151 1394 CDD ePHD 1054 1159 - -
Bva12g02151 1394 ProSiteProfiles Extended PHD (ePHD) domain profile. 1051 1160 IPR034732 -
Bva12g02151 1394 Coils Coil 1180 1200 - -
Bva12g02151 1394 MobiDBLite consensus disorder prediction 49 65 - -
Bva12g02151 1394 Pfam PHD-finger 997 1030 - -
Bva12g02151 1394 Pfam PHD-finger 293 326 - -
Bva12g02151 1394 ProSiteProfiles Zinc finger PHD-type profile. 277 328 IPR019787 -
Bva12g02151 1394 MobiDBLite consensus disorder prediction 922 944 - -
Bva12g02151 1394 ProSitePatterns Zinc finger PHD-type signature. 986 1029 IPR019786 -
Bva12g02151 1394 SUPERFAMILY FYVE/PHD zinc finger 976 1030 IPR011011 -
Bva12g02151 1394 SUPERFAMILY FYVE/PHD zinc finger 269 345 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02151 Bva-Chr12 16655852 16665078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02151 274 463 C2H2 Transcription Factor Family AT3G14740 31.606 6.34e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bva12g02151 zf-HC5HC2H_2 1.1e-22 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02151 - - gmx:100777481 1697.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02151 12 16655852 16665078 Bva12g02151 12 16655852 16665078 ECH