Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02148 ATGTATCATCTACCTCGATTTTTCGGCCatagaaagcaaaagaagcCCATGGATCCTAAGATCCGAATAAAACCGAAGCTCGAGCGCCGCAATGCTGCCAAGTTTCAGTATGACGCTGAATCGTCTTCATCGTCGTTGGGAGACTCCTCGGGAACGCTCTACACTCGATCAATGGATTTCTATGATCGAACGAGCTTCCGAATTGAGGGAGACGAGGGCGAGCTTGATCGAATATGCAGAAGTCTGGGGCTATCGGGACCAGATGACTTCGCTATTCCGCCGGCGGCCTGGGAAGCTATGAAGGTTAGGTCATCTTCGGATATCCTTCCAAGGTCGAAGCTTCAAGGATTGGATGCTCACGAGAAAGAGGATTTGAAGGAAATAGATGTAAGTCAGGAGGTGGATGAATTGAGtgataaatttgaagagaGGATTACAATTAGAGGCGTCGGTGTTCCTCCTGAGACTAGTGGATGCTGCATGGCTGGTGGTGGTGTATGCGGAGCTAGTCTTGGAGGGAGTATAAAGGGTGTCCGTCCGCCGATGCTTAAGCCACCGCCGGGTATGAGACCTCCAGTCATTGATAACGTGAGTTCCACTTGGGACCTTTGTAGGGGTTTTGCTCCGCCTGATGAGATAAAGACTTTTCATGATTACAAGGAATTGAACTCTTCGGACGATAAGGGAGAAATAcgaagaggagagaaaaaagaggtaCACGAGGAAGAACAAATAGAAGAACGGGAAGTAAACGAGGCAAGTCTGAAGGGAGAAGAGGAGGATAATGTGGCCAGGCTTGCGGAGAGTGTTGCTGATCTTTCTGGTTCGTGTTCGTTTACTACTTCAAATGAAGATGATTGTTCTAGCACTACCACGGAGCCTACTTCGAATGTATCCCCTAACGGAAAATTTAGGATTAATATTGGGTGCTGGCAAAAGGGTGACCTTTTGGGACGTGGTTCGTTTGGGTCGGTCTATGAAGGAATAAACGAGGATGGATTATTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATGAAGGAAGTCAAGGAAAACAAAGTATCTTACAATTGCAGCAGGAGATTGCTCTATTGAGTCAGTGTGAACATGAGAATATAGTTAGATACTATGGCACTGAAAtgaGTGAATCGAAGTTGTACATCTTTCTTGAGCTTGTAACTAAAGGCTCCCTACTAAATCTCTACCATAAGTACCATCTTCGAGATTCTCAAGTCTCTGCATACACAAGACAGATTCTGCATGGTTTGAAGTATCTTCATGATCTTGGTGTGATTCATAGGGATATTAAATGTGCAAATATATTGGTTCATGCAAATGGATCGGTAAAGCTTGCAGATTTTGGACTGGCAAAGGTAACCAAATTGAATGATATTAAATCGTGCAAGGGAACACCATTCTGGATGGCTCCTGAGGttgtgaaaggaaaaaatcaaGGTTATGGACTTCCGGCTGATATATGGAGTCTTGGGTGCACCGTGCTGGAGATGTTAACTCGCCAACTTCCATATTCTCACTTGGAAACTCCCATACAAGCATTGTTTAGAATTGGAAAGGGTGAACCCCCTCCTGTTCCCGATACTCTTTCAAGAGATGCGAGGGATTTCATCCTGCAGTGCCTTCATGTCAACCAAAATGATCGTCCCACTGCTGCTCAGCTCTTAGGCCATCCATTTGTCAACAGACCACTGTCACAATCTTCTGGCTCAGCATCTCCGTATCATCCCGACAGAAGGAGTTA 1757 0.4354 MYHLPRFFGHRKQKKPMDPKIRIKPKLERRNAAKFQYDAESSSSSLGDSSGTLYTRSMDFYDRTSFRIEGDEGELDRICRSLGLSGPDDFAIPPAAWEAMKVRSSSDILPRSKLQGLDAHEKEDLKEIDVSQEVDELSDKFEERITIRGVGVPPETSGCCMAGGGVCGASLGGSIKGVRPPMLKPPPGMRPPVIDNVSSTWDLCRGFAPPDEIKTFHDYKELNSSDDKGEIRRGEKKEVHEEEQIEEREVNEASLKGEEEDNVARLAESVADLSGSCSFTTSNEDDCSSTTTEPTSNVSPNGKFRINIGCWQKGDLLGRGSFGSVYEGINEDGLFFAVKEVSLLDEGSQGKQSILQLQQEIALLSQCEHENIVRYYGTEMSESKLYIFLELVTKGSLLNLYHKYHLRDSQVSAYTRQILHGLKYLHDLGVIHRDIKCANILVHANGSVKLADFGLAKVTKLNDIKSCKGTPFWMAPEVVKGKNQGYGLPADIWSLGCTVLEMLTRQLPYSHLETPIQALFRIGKGEPPPVPDTLSRDARDFILQCLHVNQNDRPTAAQLLGHPFVNRPLSQSSGSASPYHPDRRS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02148 585 SUPERFAMILY Protein kinase-like (PK-like) 285 570 IPR011009 -
Bva12g02148 585 SMART serkin_6 311 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02148 585 Gene3D Transferase(Phosphotransferase) domain 1 310 581 - -
Bva12g02148 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Bva12g02148 585 ProSiteProfiles Protein kinase domain profile. 311 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02148 585 MobiDBLite consensus disorder prediction 1 20 - -
Bva12g02148 585 MobiDBLite consensus disorder prediction 564 585 - -
Bva12g02148 585 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Bva12g02148 585 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 22 144 - -
Bva12g02148 585 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 172 576 - -
Bva12g02148 585 Pfam Protein kinase domain 312 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02148 585 MobiDBLite consensus disorder prediction 565 579 - -
Bva12g02148 585 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 22 144 - -
Bva12g02148 585 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 172 576 - -
Bva12g02148 585 MobiDBLite consensus disorder prediction 220 259 - -
Bva12g02148 585 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02148 Bva-Chr12 16635669 16641634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02148 26 569 MAP Kinase Kinase Kinase AT4G08500 53.299 5.55e-171 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva12g02148 Pkinase 4.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02148 K13414 - pop:7460930 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02148 12 16635669 16641634 Bva06g02782 06 17474496 17480107 BWGD
Bva12g02148 12 16635669 16641634 Bva12g02148 12 16635669 16641634 ECH