Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02138 ATGGAGGATTTACAGAGTTCTCTAAAGGATCGTAATTTATCCGTTTCCACGATCACAGAGAAAGGTCGCTGTCTCTTGACGACCAGAGATTTTTACCCAGGAGAGGTAATTATAAGCCAAGAGCCTTATGTATGTGTACCCAACAACTCGACAGTCGAAACAAGATGTGATGTATGTTTCAAAACAAGTAGCCTTAAAAACTGCTCAGCTTGTCATGTGGTATGGTATTGCGGAAGCACATGTCAGAAGTCAGATTGGAAGTTGCATCGTCTTGAATGTGAAGCCTTCTCAAGGCTCGACAAGGATAAGAGAAAATTCGTCACGCCATCCATACGACTGATGTTGAAACTTTATATCCGAAGGAAGTTGCAAAGTGAGGAGGTGATCCCAAGGACGGCTACGGGCAACTACAACTTAGTGGAGGCATTAGTGGCTCATATGTCTGACATTGATGAGAAACAACTGGTGCTGTACGCACAGATGGCTAATCTTGTAAATTTGATACTACGGTGGCCTGAAATCAACATAAAGGAGATTGCAGAGAATTTTTCCAAGTTCGCATGCAATGCACACACCATATGTGACAGTGAATTGAGACCCTTGGGAACAGGATTGTACCCTGTAATTTCCATTATCAACCACAGCTGCTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAGATCCGCTGTAGTACGTGCTGTGCAACATATACCCAACGGTTCTGAGGTCCTGATAAGTTACATAGAGACCGCTGGAAGCAGTATGACTCGGCAGAAGGTTCTGAAAGAGCAGTACCTATTCACTTGCACATGTCCACGCTGTGTTAAAGTGGGACAGTATGATGATATCCGAGAAAGTGCAATCCTAGAAGGATACAGATGCAAAAATGAGAAGTGTGATGGTTTCTTGCTTCGTGCAGCCGATGGCAAGGGATTTGAATGCCAAGAATGTGGACTAGTTAgaaacaaggaagagataaAGAAGATTGCAGCTGAGGTGAAATTACTATCAGAAGACAAAGCTCCTAAACTTTCTTCGACTGGGAATTGTCAAGAAGCTGTTTCTATGTATAAGATGATTGAGAAACTCCAAACAAAACTGTGCCATCCTTTCTCAATCAGCCTGATGCAAACTCGCGACAAGATTCTGAAGTTACTGATGGAGTTGGAAAATTGGAGAGAAGCTCTAGAATACTGCAAATTGACCATACCAGTCTATCAAAGAGTTTATCCAGCCATTCATCCTTTGCTTGGTTTGCAATATTACACATGTGGAAAGCTTGAATGGTTTTTGGGAGACACAGAGGAAGCTCTTAAATCACTGACAAAGGCAGTGGATGTACTACGTATTACGCATGGAACAAATACACCTTTCATGAAGGAACTTTTGATGAAGTTGGAAGAAGCGCGTGCTGAAGTCTCTTATAATAACAAACAATCCTACGATGAGTA 1451 0.4183 MEDLQSSLKDRNLSVSTITEKGRCLLTTRDFYPGEVIISQEPYVCVPNNSTVETRCDVCFKTSSLKNCSACHVVWYCGSTCQKSDWKLHRLECEAFSRLDKDKRKFVTPSIRLMLKLYIRRKLQSEEVIPRTATGNYNLVEALVAHMSDIDEKQLVLYAQMANLVNLILRWPEINIKEIAENFSKFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSAVVRAVQHIPNGSEVLISYIETAGSSMTRQKVLKEQYLFTCTCPRCVKVGQYDDIRESAILEGYRCKNEKCDGFLLRAADGKGFECQECGLVRNKEEIKKIAAEVKLLSEDKAPKLSSTGNCQEAVSMYKMIEKLQTKLCHPFSISLMQTRDKILKLLMELENWREALEYCKLTIPVYQRVYPAIHPLLGLQYYTCGKLEWFLGDTEEALKSLTKAVDVLRITHGTNTPFMKELLMKLEEARAEVSYNNKQSYDE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02138 483 Coils Coil 375 395 - -
Bva12g02138 483 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 1 473 - -
Bva12g02138 483 Coils Coil 319 339 - -
Bva12g02138 483 ProSitePatterns Zinc finger MYND-type signature. 56 93 IPR002893 -
Bva12g02138 483 ProSiteProfiles Zinc finger MYND-type profile. 56 93 IPR002893 -
Bva12g02138 483 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1 1 473 - -
Bva12g02138 483 Gene3D SET domain 24 274 IPR046341 -
Bva12g02138 483 SUPERFAMILY TPR-like 344 447 IPR011990 GO:0005515
Bva12g02138 483 Gene3D - 55 105 - -
Bva12g02138 483 ProSiteProfiles SET domain profile. 11 248 IPR001214 GO:0005515
Bva12g02138 483 SMART set_7 11 254 IPR001214 GO:0005515
Bva12g02138 483 Pfam SET domain 22 247 IPR001214 GO:0005515
Bva12g02138 483 SUPERFAMILY SET domain 11 247 IPR046341 -
Bva12g02138 483 Gene3D - 106 190 - -
Bva12g02138 483 Gene3D Tetratricopeptide repeat domain 402 482 IPR011990 GO:0005515
Bva12g02138 483 Pfam MYND finger 56 93 IPR002893 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva12g02138 SET 2.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02138 K11426 - cit:102613642 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02138 12 16565293 16570151 Bva12g02138 12 16565293 16570151 ECH