Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02137 ATGGATGGGAAGGCTAACCTTCCGGTAACCAAGAATCCGATCCGCCCAATCAACCCAGATACAACATCGTCTTCCTCAtcttccttctcttcctcCTCGCCGCCGGACTTCCTCCGGAATGTTCAAGCCGCCTTAAAGCGCCATCGTCCTATTGGTGCAATGCAGTCAAACAATATAAGGCCTAGACGCATGGTGGTTCCTCAGAGGGAGGCGTCAAGAAGTTCTACATCTAATGTAGGTCCCGCTGCAGATGCGAAGAAGTCTCAAGATATGTCTTTAAGTCTGAGGTGGTCAGAGAAGGATTCACTTCTGCATAAAAAGAACACAGAGTCTGTTATTGGGGTTGGTCAGGAGGATGCGTCAATCACACCCCCTTCAATTGCCGGCTCTTTCACCAATACATTTGATGAAGGTTGCAATCCATTTGAAGCACAAGAACGACATCCTAAAGAAATGGCTAATTGTGAAGACAAGAACAACGTCCCTTCGTTGCAGGTTGAATACCAAAATGAAGATGTTCAGAAGAAAGTCCAATTTGCAATTCGAAGCAACCATGATGCCCAggGGGCCGATGATGGAAAGGCCACTGAGTTGGAGAACTTATCTTCTCATATGGGTTCACTTGCATTGACAGAAATGGAATGGGTTGCAAGCAGCCAACCGGAAGCATCAATTGCTGTCAACCAGGACTTGAAGCACCAAAATCTTCAGCAGGCAGAGTCCGAAATAAGTATGAGATCAGACGGAGGAATAAGTTCTCTGTTGACAAAAAGAACAACGGTCATTCAGGATCATCTGCAGCAGTTCAGAAACTTTTTAAGTCAACCAGCTACTCAATCTTCTGTAGTGGGGCCTTCATGTGCTACAACAACATCAGTTCATTCAGCTTCAGCGCCCATGCTAAATTCAACAACCCGTTATTCTCACTCACATATAGACGGTGGCTCACTTGTTGCAGCTCAATGTTTGGGAGATCTTAATGTTAATTCTCATCCTACAACACAAGGGGCTCACGTGAAATCATCAAACTCCTCCCTTAAAGACCCCAGTAGAATCTCAACTGATCAGACAGCGTTGGCAGTCCCTGCTTCAAATTCTACTATTGATGCAGAGTTGGCTTGTAAGGGTAATGACCTGTATAAGGAGCAGCAAGGCGTCTCGATAAAGGAAAATAGCATTTCAAAAAATAGTGCTTGTTATGACGATAAGTCAACCAAAGGGAAAGAGTCTGGAGATGTTGTCAACGTACAGCCTCAGGCTCCAATTTCCAAAATATCAACTTCAGTAACGAAGCCGGAGTCTtctaaattagaaaaacaagagaagggCGGAGGTAGTAAGGGTGCATCAACTACTCGCAAAAGAACCTATGACCCCGATTTGttcttcaaagtaaatggGAAGCTTTATCAAAGGCTTGGCAAGATAGGAAGTGGAGGAAGCAGTGAGGTACACAAAGTAATATCATCAGACTGTACTGTATATGCACTTAAAAAGATCAAGCTTAAGGGTCGTGATTATTCCACTGCATATGGGTTTTGTCAAGAGATTGAGTATCTAAATAAGCTGAAAGGAAAGAATAATATCATACAGCTGATTGATTATGAGGTGACTGACAAGGCCTTgcttgaggaagttatgagaGGCTCCTTGAGTAATAAGGATGGGAGAGTCAAGGATgatggatatatatacatggtaCTTGAATACGGAGAAATTGATTTGGCTCACATGCTATCCCAGAAGTGGAAAGAGCTGGATGGATATAACCAGACCATAGATGAGAACTGGCTCCGGTTTTACTGGCAGCAAATTCTTCAAGCTGTCAATACAATTCACGAGGAACGTATAGTGCACTCTGACTTGAAGCCAGCGAACTTCCTTCTTGTCAAGGGCTTCCTAAAACTGATCGATTTTGGCATTGCAAAGGCAATAATGAGCGACACAACAAACATCCAACGAGACTCCCAgGTGGGTACTCTGAGTTACATGTCTCCAGAAGCATTCTTGTGCAACGAGTGTGATGCTAATGGAAACATTATTAAGTGTGGTCGGCCATCAGATATCTGGTCTCTGGGCTGTATACTTTATCAAATGGTATATGGCCGAACACCTTTTTCAGAGTACAAGACATTCTGGGCCAAATTCAAGGTTATAACGGAtccaaattatgaaattacatATGAACCAGTTTCAAACCCTTGGCTTCTGGATATTATGAAAAGGTGTCTAGCATGGGACCGCAACAAAAGGTGGAGAATTCCTCAGCTACTCCAACACCCTTTCCTTGTTCCACCAGTTCCACAATCACCTTCCTCGTCCCAACACCAAAGCTGTAAATTATTGCAAGTTATTGCTGAAACTTGCATAGATGACCCAGAAGCTTCGCAGTTATGTTGTCAGCTCCAGCAGCTACTGGGTGACCCACTCCAGTTAATACCACCCGACTCCCTGAAAACGCGAAGTCAACAGCTTCATCTCTTGTCCCAATTGTCAACACTTTGTTTTCAGCTCCAGGAACGTTTGACAGATACAGATAAAGATTA 2546 0.4203 MDGKANLPVTKNPIRPINPDTTSSSSSSFSSSSPPDFLRNVQAALKRHRPIGAMQSNNIRPRRMVVPQREASRSSTSNVGPAADAKKSQDMSLSLRWSEKDSLLHKKNTESVIGVGQEDASITPPSIAGSFTNTFDEGCNPFEAQERHPKEMANCEDKNNVPSLQVEYQNEDVQKKVQFAIRSNHDAQGADDGKATELENLSSHMGSLALTEMEWVASSQPEASIAVNQDLKHQNLQQAESEISMRSDGGISSLLTKRTTVIQDHLQQFRNFLSQPATQSSVVGPSCATTTSVHSASAPMLNSTTRYSHSHIDGGSLVAAQCLGDLNVNSHPTTQGAHVKSSNSSLKDPSRISTDQTALAVPASNSTIDAELACKGNDLYKEQQGVSIKENSISKNSACYDDKSTKGKESGDVVNVQPQAPISKISTSVTKPESSKLEKQEKGGGSKGASTTRKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTVYALKKIKLKGRDYSTAYGFCQEIEYLNKLKGKNNIIQLIDYEVTDKALLEEVMRGSLSNKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGYNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGFLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFLCNECDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNYEITYEPVSNPWLLDIMKRCLAWDRNKRWRIPQLLQHPFLVPPVPQSPSSSQHQSCKLLQVIAETCIDDPEASQLCCQLQQLLGDPLQLIPPDSLKTRSQQLHLLSQLSTLCFQLQERLTDTDKD 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02137 848 Gene3D Phosphorylase Kinase; domain 1 463 549 - -
Bva12g02137 848 ProSitePatterns Protein kinases ATP-binding region signature. 476 498 IPR017441 GO:0005524
Bva12g02137 848 CDD PKc_Mps1 468 763 - -
Bva12g02137 848 Pfam Protein kinase domain 470 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02137 848 SUPERFAMILY Protein kinase-like (PK-like) 464 772 IPR011009 -
Bva12g02137 848 MobiDBLite consensus disorder prediction 15 38 - -
Bva12g02137 848 SMART serkin_6 470 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02137 848 MobiDBLite consensus disorder prediction 1 93 - -
Bva12g02137 848 MobiDBLite consensus disorder prediction 69 83 - -
Bva12g02137 848 Gene3D Transferase(Phosphotransferase) domain 1 585 766 - -
Bva12g02137 848 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 22 812 IPR027084 GO:0004712|GO:0007093|GO:0051304
Bva12g02137 848 MobiDBLite consensus disorder prediction 397 453 - -
Bva12g02137 848 PANTHER MIXED LINEAGE PROTEIN KINASE 22 812 - -
Bva12g02137 848 ProSiteProfiles Protein kinase domain profile. 470 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02137 848 MobiDBLite consensus disorder prediction 410 433 - -
Bva12g02137 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02137 Bva-Chr12 16559796 16565151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02137 476 764 MAP Kinase Kinase Kinase AT4G08470 29.452 7.91e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Bva12g02137 Pkinase 2.8e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02137 12 16559796 16565151 Bva12g02137 12 16559796 16565151 ECH