Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02122 atgattttTTCTGCAACTAATCGGTTGATCACATCCAAGGACCATGCTTCTGTCCAGATTAACGTTGGGCATTTGGATGAGAATGGCATCTACAATGGCCATTTCTCCACATTTGACCTTTTGCGGCTTTATTCGTGCTCAGTGGAGACCTGCTATGGTCTCTATATTTTCCTGAAATTTGATAGTCCAAATAGTGCATCTACCTACATTCTGGTTTATGCTATTTG 227 0.4009 MIFSATNRLITSKDHASVQINVGHLDENGIYNGHFSTFDLLRLYSCSVETCYGLYIFLKFDSPNSASTYILVYAI 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02122 75 PANTHER 40S RIBOSOMAL PROTEIN S21 4 50 - -
Bva12g02122 75 PANTHER 40S RIBOSOMAL PROTEIN S21 4 50 IPR001931 GO:0003735|GO:0005840|GO:0006412
Bva12g02122 75 Pfam Ribosomal protein S21e 4 40 IPR001931 GO:0003735|GO:0005840|GO:0006412
Bva12g02122 75 Gene3D - 1 49 IPR038579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02122 Bva-Chr12 16490895 16491619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02122 4 40 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 78.378 1.04e-16 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02122 K02971 - jre:108994966 75.8701