Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02111 ATGATGGGAGAGATATTATGTGGTGGGAGTTTGGGGAAGGTGTTCACTAAGGCAAAACCCTATTTGTTAATGGTGGGTTTGCAATTTGGGCTTGCTGGAACATTCATTTTCACCATGGCTAGCCTTAGCCGTGGGATGAATCGTTTTGTCTTCATTGTCTACCGCAATGCCATTGCTGCATTTGCCCTTGCTCCTTTtgcattcttttttgaaaGgAAAATCAGGCCAAAGATGACAATCTCTGTCTTTTTACAGATAATGGCTCTCGGTTTTCTAGAGCCAGTTATTGATCAAGGCTTTACATTCCTGGGGATGCAATACACTTCGGCTTCATTTGCATCTGCTATCATAAATGCCGTGCCCTCTATCACCTTTGTGCTGGCAGTTATTCTCCGGTTAGAGCGTGTAAAGATTAAGGAGCTGCGGAGTCAAGCGAAGGTGCTTGGGACATTGCACCAAGGTGGGAGCCAGTCCCCTCATGCACACTGGCTCACTGGCACGCTGTTCATACTACTGGGTTGTGTCGCTTGGTCTTCTTTCTACATTTTGCAGTCCATAACAGTGAAGAAATACCCAGCGGAGTTATCACTAGCATCGTTGATATGCTTAATGGGTGCTTTGCAAAGTGCAGCAGTGGCGCTTGTGGTTGAGCATCATCCAAGGGCATGGGCTATTGGTTGGGACTATAGGTTCTTCTGTCCTCTCTACACGGGAATAGTTAGCTCAGGGATTGCTTATTATGTGCAAGGTTTGGTATTGCAAAGCAGGGGTCCAGTGTTCGTGACTGCCTTTAATCCTCTCTGCATGATCATAACTGCTGCTTTGGGCTCCTTCCTTTTAGCAGAACAAATCCACCTGGGAAGTGTTATTGGGGGGATTGTTATTGCGTTGGGCCTTTATTCTGTGGTGTGGGGAAAAGGCAAAGACTATCCTTCAGACCTCGCACCGCGAACAACAGTGACACAACAACAGCTGCCAATTACTACAATTGATATTTGCAAATCGTGCACTGATGAGAAAACCAACCATCACCAACAATGCACAAAGTA 1049 0.4547 MMGEILCGGSLGKVFTKAKPYLLMVGLQFGLAGTFIFTMASLSRGMNRFVFIVYRNAIAAFALAPFAFFFERKIRPKMTISVFLQIMALGFLEPVIDQGFTFLGMQYTSASFASAIINAVPSITFVLAVILRLERVKIKELRSQAKVLGTLHQGGSQSPHAHWLTGTLFILLGCVAWSSFYILQSITVKKYPAELSLASLICLMGALQSAAVALVVEHHPRAWAIGWDYRFFCPLYTGIVSSGIAYYVQGLVLQSRGPVFVTAFNPLCMIITAALGSFLLAEQIHLGSVIGGIVIALGLYSVVWGKGKDYPSDLAPRTTVTQQQLPITTIDICKSCTDEKTNHHQQCTK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02111 349 PANTHER WAT1-RELATED PROTEIN 156 324 IPR030184 GO:0016021|GO:0022857
Bva12g02111 349 PANTHER WAT1-RELATED PROTEIN 14 151 IPR030184 GO:0016021|GO:0022857
Bva12g02111 349 PANTHER WAT1-RELATED PROTEIN 156 324 - -
Bva12g02111 349 PANTHER WAT1-RELATED PROTEIN 14 151 - -
Bva12g02111 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 307 - -
Bva12g02111 349 Pfam EamA-like transporter family 165 303 IPR000620 GO:0016020|GO:0016021
Bva12g02111 349 Pfam EamA-like transporter family 20 140 IPR000620 GO:0016020|GO:0016021
Bva12g02111 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02111 Bva-Chr12 16436791 16439212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02111 8 345 Nodulin-like Gene Family AT1G44800 45.355 1.89e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02111 - - gmx:100777641 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02111 12 16436791 16439212 Bva12g02111 12 16436791 16439212 ECH