Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02110 ATGGAGAAAATGGGTGAACaagcatcatcatcatcatgtggAAGGTTAAGTTCAATGCTTCAAAACTCAAAACCTTCCTTGTTAATGGTAGCCATGCAATTTGGGTCAGCTGGAATGTATATTATCACCATGTCCACTTTTAACAGAGGCATGAGTCGCTATGTCTTCATCGTCTACCGTAATGCTATGGCCGCGGTTATTCTTGccccttttgctttctttattgAGAGGAAAGTTAGGCCAAAAATGACATTCCCTGTCTTCTGGAGGATAATGCTGCTGGGATTTCTAGAGGTGGTAGTGGACCAAGGATTCGCTTTCCTGGGGATGGTTAACACCTCAGCAACATATACGTCTGCAATTCTGAATGCTTTGCCCTCCATAACGTTTGTCATGGCTGTCATTCTACGGatagaacaaataaaaataaaggagatTTGGAGCAAAGCCAAGGTGATTGGAACTGCGATAACATTTGGAGGTTGTGTGCTGATGGCTCTCTATAAGGGTCCCATTGTTAATATATTTGGCTCGTCCTTCGGAAATGGCTACCATCCCACTAATACCAACTCATCGTCCTCCCAGAATTGGATTATTGGGACAGTTTATCTCTTCGTATCTTGTGTAGCCTTTTCTACTTTCTACGTATTACAATCCATGGTACTGAAGATATACCCAGCGGAAATGTCACTATCCTGCTTGCTCTGCTTTTTTGGAGCACTGCAAGCAGTAGGTATCGCAGTTGGAATTGAGCACCGCCCTCAAGCTTGGGCCCTTGGCTGGGATTCAAGGCTTTTTGCTCCACTCTACGCTGGGATAGTAACCACGGGGATTATGTTCTACGTGCAAGGCAAGGTGATACGAAGCAGAGGACCTGTATTTGTAACAGCCTTTAATCCTCTGCGCATGATCATTGTGGCTATTTTGGCCCTTGCAATTCTAGGCGAGAAACTTTACTTGGGAAGCGTTGTCGGAAGCGTTTTTGTTGTTATTGGTCTGTATGCTGTTATATGGGGCAAAAGCAAGGAGCGTGATTCCAGGAGTGAGATTCAGATCGCAGACGCCCAACAGCTACAGCAACAATTCCCTGTGATTATACAAATGCCATCCACAGATACCGATTCTCATGTTAAAATCCCCCAACAAACCCACACTTTACAGATCATGGCCAAGCCTTGCCCTGAAATGGCAACTAGAGTTTA 1202 0.426 MEKMGEQASSSSCGRLSSMLQNSKPSLLMVAMQFGSAGMYIITMSTFNRGMSRYVFIVYRNAMAAVILAPFAFFIERKVRPKMTFPVFWRIMLLGFLEVVVDQGFAFLGMVNTSATYTSAILNALPSITFVMAVILRIEQIKIKEIWSKAKVIGTAITFGGCVLMALYKGPIVNIFGSSFGNGYHPTNTNSSSSQNWIIGTVYLFVSCVAFSTFYVLQSMVLKIYPAEMSLSCLLCFFGALQAVGIAVGIEHRPQAWALGWDSRLFAPLYAGIVTTGIMFYVQGKVIRSRGPVFVTAFNPLRMIIVAILALAILGEKLYLGSVVGSVFVVIGLYAVIWGKSKERDSRSEIQIADAQQLQQQFPVIIQMPSTDTDSHVKIPQQTHTLQIMAKPCPEMATRV 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02110 400 PANTHER WAT1-RELATED PROTEIN 23 358 - -
Bva12g02110 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 343 - -
Bva12g02110 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 169 - -
Bva12g02110 400 PANTHER WAT1-RELATED PROTEIN 23 358 IPR030184 GO:0016021|GO:0022857
Bva12g02110 400 Pfam EamA-like transporter family 36 166 IPR000620 GO:0016020|GO:0016021
Bva12g02110 400 Pfam EamA-like transporter family 199 337 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02110 Bva-Chr12 16430866 16432682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02110 20 358 Nodulin-like Gene Family AT1G44800 45.000 1.97e-113 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02110 - - rcu:8274104 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02110 12 16430866 16432682 Bva12g02110 12 16430866 16432682 ECH