Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02109 ATGGAAGACCAAACCTCCGGTAATGGGTTCAGCAAGAGGCTCCACAAGTTAAAGCCTTACCTTGCCATGGTGTCCCTTCAATTTGGTTACGCCGGCATGTATGTAATCACCATGGTTTCCTTCAAGCATGGCATGAGCCATTGGATACTCTCAGTGTACCGTCACGTATTTGCTACTATAGTCATTGCCCCCTTTGCGATTGTCCTTGAAAGAAAAATAAGGCCAAAGTTGACCCTCCCCATTTTCCTGAGGATGGTGGTGCTTGGATTCCTTGAGCCAGTGCTTGATCAGAACCTGTACAATATGGGAATGAAGTACACCTCGACAACGTTCGCTTCTGCCACGGTTAATGTTCTTCCAGCCATAACTTTTGTAATGGCACTCATGTTCAGGTTAGAGACTGTCAACTTGAGAAAGCTTCACAGTCTAGCCAAGGTAATTGGAACTGCAATTACAGTCGTAGGAGCCATGGTTATGACTTTGTACAAAGGCCCCGCCCTTCAAATCATAAAGGGTCACGGCGCGAGCAACCACGACGGAGCCAATGCCGAGTCCTCGGACCAGAATTGGGTTGTTGGCACACTAATGCTCATAGCAAGTTGCGGTGGTTGGGCTAGCTTCTTCATTTTGCaaTcattaactttgaagttgtACCCAGCTGAGCTCTCCCTCACAGCTTGGATCTGCTTGTTGGGGATTATTGAGGGTGGAATTGCGTCACTTATAATGGAAAGGAACATGAGTGTATGGGCCATAGGCTGGGATTCAAGGCTCCTTGCTTGTGTTTATTCTGGGGTGGTTTGCTCTGGAATGGCATATTATGCACAAGGAGTTGTGACGAGGGAACGTGGACCAGTTTTTGTAACTTCTTTCAGTCCTCTGATTATGATCATCACTGCTGCATTGGGTTCAATTGTCCTAGCAGAGCAAATTCACCTTGGAAGTATCGTTGGAGCAATTCTCATTGTGTTCGGGCTTTACTCTGTGGTGTGGGGGAAAAGCAAAGACGAAATAAAGACAACAGACACCGAGAAAGGTGAAGGGCACGAATTGCCAATCAAAGACAGTAACACTAGATCAGGATCAGACATTTTTGACAACATTGAGGTTAATGTTACTGGAGAAAAGAATGTCCCAGCAGAAGCAGGAGCAAGATCATG 1160 0.4569 MEDQTSGNGFSKRLHKLKPYLAMVSLQFGYAGMYVITMVSFKHGMSHWILSVYRHVFATIVIAPFAIVLERKIRPKLTLPIFLRMVVLGFLEPVLDQNLYNMGMKYTSTTFASATVNVLPAITFVMALMFRLETVNLRKLHSLAKVIGTAITVVGAMVMTLYKGPALQIIKGHGASNHDGANAESSDQNWVVGTLMLIASCGGWASFFILQSLTLKLYPAELSLTAWICLLGIIEGGIASLIMERNMSVWAIGWDSRLLACVYSGVVCSGMAYYAQGVVTRERGPVFVTSFSPLIMIITAALGSIVLAEQIHLGSIVGAILIVFGLYSVVWGKSKDEIKTTDTEKGEGHELPIKDSNTRSGSDIFDNIEVNVTGEKNVPAEAGARS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02109 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Bva12g02109 386 Pfam EamA-like transporter family 23 159 IPR000620 GO:0016020|GO:0016021
Bva12g02109 386 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020|GO:0016021
Bva12g02109 386 PANTHER WAT1-RELATED PROTEIN 13 360 IPR030184 GO:0016021|GO:0022857
Bva12g02109 386 MobiDBLite consensus disorder prediction 340 362 - -
Bva12g02109 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 334 - -
Bva12g02109 386 PANTHER WAT1-RELATED PROTEIN 13 360 - -
Bva12g02109 386 MobiDBLite consensus disorder prediction 340 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02109 Bva-Chr12 16419422 16422324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02109 13 378 Nodulin-like Gene Family AT4G08300 65.135 9.45e-174 487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02109 12 16419422 16422324 Bva12g02109 12 16419422 16422324 ECH