Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02092 atggCGGATTCTAAGGTGGAGACGATTTCCAGATTAGCTCAGTGgaaaattgagaattttgGACCTTGCTCCTATAAAAAATCCGACCCTTTCAAGATCGGAATCTGGAATTGGTACTTATCAATTGAAAGGAATAGATATCTGTACATTCGTCTATTTCCAGAGGCCTCACGGGTTTCTAAGGAACAGCCACCAATTGCTCGCTTTATTCTCCGAGTCTCTAGCACCGGCGCATCCCGCAGATTTTACATTTCTCCTATTCATGAAAGACTGCTCAGGACATGCGATGACTTTTTCTGGCCCGTTGATACTACATTTGCTGGTCGCTTTATTATTGATGTTGAATTTCTTGACCTGAAGATCTGTCCACTGAATGGTGGAGAAGCCAGTTCTATATGGCCATCTGATGGAACGTTGCAATCTGTTGCAGCTCAAAGCACTCTCCGATGCCTCGCCCGCATGCTTGATGAGGGCATTCATGCTGACCTGACCATTCATACTGGAGATGGTGCATTGAGAGCTCACAAGGCAATTCTGTCTGCAAGTTCTCCTGTGTTCCAGAGCATGTTTCATCACGACCTGAAGGAAAAAGAGTCGTCTACAATCCACATAGAAGACATGTCGCGGGAATCTTGCATGGCCCTTCTAAGTTACTTGTATGGCACAATAAAGCAAGAAGATTTCTGGAAGCACCGGATTGCATTGCTCGGAGCAGCCAATAAATATGACATAACTGGCCTGAAAGATGCATGCGAGGAAAGCCTACTGGAAGATCTAAACTCAGGAAATGTTCTTGAGAGGTTAAATGAAGCCTGGCTTTATCAGTTGCACAAATTGAAGAAAGGGTGTTTGATgttcttatttgattttggtaaaatatatGATGTTCGGGATGAAATAAACAACTTCTTCAGACATGCAGATAGGGAGCTGATGCTGGAGATGTTTCAGGAGGTGCTATCGGTCTGGAAACCAATGTA 980 0.4255 MADSKVETISRLAQWKIENFGPCSYKKSDPFKIGIWNWYLSIERNRYLYIRLFPEASRVSKEQPPIARFILRVSSTGASRRFYISPIHERLLRTCDDFFWPVDTTFAGRFIIDVEFLDLKICPLNGGEASSIWPSDGTLQSVAAQSTLRCLARMLDEGIHADLTIHTGDGALRAHKAILSASSPVFQSMFHHDLKEKESSTIHIEDMSRESCMALLSYLYGTIKQEDFWKHRIALLGAANKYDITGLKDACEESLLEDLNSGNVLERLNEAWLYQLHKLKKGCLMFLFDFGKIYDVRDEINNFFRHADRELMLEMFQEVLSVWKPM 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02092 326 PANTHER OS08G0495500 PROTEIN-RELATED 1 326 IPR044714 -
Bva12g02092 326 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
Bva12g02092 326 PANTHER OS08G0103600 PROTEIN 1 326 - -
Bva12g02092 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Bva12g02092 326 Gene3D Potassium Channel Kv1.1; Chain A 135 288 IPR011333 -
Bva12g02092 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Bva12g02092 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Bva12g02092 326 SUPERFAMILY POZ domain 143 257 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02092 Bva-Chr12 16331226 16334074 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva12g02092 BTB 4.2e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02092 K10523 - rcu:8278000 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02092 12 16331226 16334074 Bva12g02092 12 16331226 16334074 ECH