Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02086 ATGGAGTTGGAATCGGAGATTTTGGGTAcccagaaagaagaagaattagcACGACAACAGAAGGAGCTGGAAGTGGTGGAGGAGCATTTCCACGTTTTAGCAGTAGATGACAGTATAATTGACAGGAAGCTTCTGGAAAGGCTCCTCAGAGTTTCTTCCTACAAGGTTACCTCAGTTGACTCCGGAGATAAGGCTCTCAAATATCTTGGTCTGCTGGATGAGCTTGACACTAATGCTTCTACTTCGTCAgaatcatcatcttcttctccttcctcgCCACAACAAGAGGGAATGAAAGTGAATATGATCATGACAGACTACTGTATGCCGGGGATGAGTGGCTATGATTTGCTTAAACGGGTCAagGGATCTTCTTGGAAAGATGTTCCAGTGGTGATTATGTCATCAGAAAATATACCTTCCAGAATCAGCATGTGCTTGGAGGGAGGAGCAGAGGAATTTCTATTGAAGCCTCTAAAGTTATCTGACTTAAAGAAGCTTCAGCCACATCTTCTCAAAACCTTGAACCATTCTAGTAGTGAACAACAACCACCAGCTAACAATTTCACAGCTTGCAACAATGATGCTAATGTCGACGACAACAGTAACCCTAACAACAATAATAGTTTTAGCAAAAGAAAGGCAGTGTCTCCCGAACCTTCGGATCAGAGATCAAGATCCAAAATGAAAGGGATGGAAGTGTTGta 707 0.396 MELESEILGTQKEEELARQQKELEVVEEHFHVLAVDDSIIDRKLLERLLRVSSYKVTSVDSGDKALKYLGLLDELDTNASTSSESSSSSPSSPQQEGMKVNMIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENIPSRISMCLEGGAEEFLLKPLKLSDLKKLQPHLLKTLNHSSSEQQPPANNFTACNNDANVDDNSNPNNNNSFSKRKAVSPEPSDQRSRSKMKGMEVL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02086 235 Coils Coil 9 29 - -
Bva12g02086 235 MobiDBLite consensus disorder prediction 177 216 - -
Bva12g02086 235 MobiDBLite consensus disorder prediction 217 235 - -
Bva12g02086 235 ProSiteProfiles Response regulatory domain profile. 31 172 IPR001789 GO:0000160
Bva12g02086 235 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 234 IPR045279 GO:0009736
Bva12g02086 235 CDD REC_typeA_ARR 32 167 - -
Bva12g02086 235 Pfam Response regulator receiver domain 32 166 IPR001789 GO:0000160
Bva12g02086 235 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 12 234 - -
Bva12g02086 235 SMART REC_2 30 168 IPR001789 GO:0000160
Bva12g02086 235 MobiDBLite consensus disorder prediction 177 235 - -
Bva12g02086 235 Gene3D - 31 206 - -
Bva12g02086 235 SUPERFAMILY CheY-like 30 175 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02086 Bva-Chr12 16294456 16297058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02086 27 174 Response Regulator Gene Family AT3G57040 60.403 1.41e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva12g02086 Response_reg 4.6e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02086 K14492 - zju:107406325 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02086 12 16294456 16297058 Bva12g02086 12 16294456 16297058 ECH