Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02083 ATGGCAGAGCGTGTGTCACTGATACTTTCACTTCCATCAGTATCACATTCTCGAACGTCCCCGCCGAGGATGGCCGCCTTCGCTGGTGGCGCCGCAGTCTCTTCTCGTCTTAACCCCTCCGCTACCAGAGCCTCTCTCTGCCTTACTTCTTCCTCTCGCTCGCCATCACTCGTCTCCTTCACTTCTCTGGCCTCGCTCAAATGCCTGAGATCATCACCGCGCATTTCTCACCTCTTCCTCGATCAGAGTAGAGCAGAGGTTCGTGCATCGAGTGGAGGATACAGCACAGTGTCTGCGCCCAAGTCCTTTGCGTCTGATCCTGATCAGCTGAAGAGTGCTAGAGAAGATATCAAGGAGCTTCTCAGGACTAAGTTTTGTCATCCTATTATGATTCGCTTGGGGTGGCATGATGCTGGTACTTATAACAACAACATTGAGGAGTGGCCACAGAGAGGTGGTGCTAATGGTAGCTTGAGATTTGAGGTTGAGCTGAAACACGCAGCCAATGCTGGACTTGTAAGTGCACTGAAGCTTCTTCAGCCAATCAAAGACAAGTACTCTGGTGTGACTTATGCAGACTTGTTTCAGTTGGCTAGTGCAATTGCTGTGGAGGAGGCTGGAGGCCCAAAAATTCCAATGAAGTATGGGAGAGTTGATGTCTCAGCACCTGAACAATGCCCTGAAGAAGGGAGACTCCCTGATGCTGGCCCCCCATCACCCGCTGATCATTTACGCCAAGTTTTCTACAGAATGGGATTGAATGACAAGGAAATAGTTGCATTATCTGGCGCTCACACACTGGGACGGTCTAGACCAGAACGTAGTGGCTGGGGTAAACCTGAGACGAAATATACGAAAGATGGACCGGGAGCACCAGGAGGGCAGTCCTGGACCGCACAATGGTTGAAATTTGACAACTCTTACTTCAAGGTCAAAACGTCGgacataaaagaaagaaaggatgaAGATTTATTGGTCTTGCCAACTGATGCTGTTCTTTTTGAAGATCTATCGTTCAAGGTATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCCAACCTTAGCAACCTTGGTGCTAAATTTGATCCTCCAGAGGGTATTGTGATAGATGATTTTTCTCCAAAAGTTCAACCAGAGAAGTTCGTAGCAGCCAAGTACTCGACTGGAAAGAGAGAGCTGTCAGAGTCTATGAAGCAGAAGATCCGAGCTGAGTATGAGGCGATTGGTGGAAGCCCAGATAAGCCTCTACCGACAAACTATTTTCTAAATATCATGATTGTGATTGCTGTTTTGGCAATTTTGACATTTCTGCTTGGAAACTA 1352 0.4682 MAERVSLILSLPSVSHSRTSPPRMAAFAGGAAVSSRLNPSATRASLCLTSSSRSPSLVSFTSLASLKCLRSSPRISHLFLDQSRAEVRASSGGYSTVSAPKSFASDPDQLKSAREDIKELLRTKFCHPIMIRLGWHDAGTYNNNIEEWPQRGGANGSLRFEVELKHAANAGLVSALKLLQPIKDKYSGVTYADLFQLASAIAVEEAGGPKIPMKYGRVDVSAPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKVKTSDIKERKDEDLLVLPTDAVLFEDLSFKVYAEKYAEDQEAFFKDYAEAHANLSNLGAKFDPPEGIVIDDFSPKVQPEKFVAAKYSTGKRELSESMKQKIRAEYEAIGGSPDKPLPTNYFLNIMIVIAVLAILTFLLGN 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02083 450 Gene3D - 113 370 - -
Bva12g02083 450 Pfam Peroxidase 114 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 PRINTS Plant ascorbate peroxidase signature 188 206 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 PRINTS Plant ascorbate peroxidase signature 127 142 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 PRINTS Plant ascorbate peroxidase signature 207 219 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 PRINTS Plant ascorbate peroxidase signature 330 354 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 PRINTS Plant ascorbate peroxidase signature 106 126 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 30 384 - -
Bva12g02083 450 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 402 450 IPR044831 GO:0004601|GO:0034599
Bva12g02083 450 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 30 384 IPR044831 GO:0004601|GO:0034599
Bva12g02083 450 PRINTS Haem peroxidase superfamily signature 189 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 PRINTS Haem peroxidase superfamily signature 207 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 PRINTS Haem peroxidase superfamily signature 127 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 PRINTS Haem peroxidase superfamily signature 297 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 SUPERFAMILY Heme-dependent peroxidases 107 370 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 Gene3D Peroxidase, domain 2 235 362 - -
Bva12g02083 450 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 402 450 - -
Bva12g02083 450 ProSitePatterns Peroxidases proximal heme-ligand signature. 257 267 IPR019793 -
Bva12g02083 450 CDD ascorbate_peroxidase 98 372 - -
Bva12g02083 450 ProSiteProfiles Plant heme peroxidase family profile. 189 378 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva12g02083 450 MobiDBLite consensus disorder prediction 266 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02083 Bva-Chr12 16271682 16276190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02083 189 367 Peroxidase AT2G22420 31.683 1.03e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02083 K00434 - vvi:100254009 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02083 12 16271682 16276190 Bva08g00879 08 4506898 4508770 ECH
Bva12g02083 12 16271682 16276190 Bva12g02083 12 16271682 16276190 ECH