Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02082 ATGGCTGGTGAGGAGCCGAAGAACGTTTTCGATGCAGAAGCTGCTTCCTCGCTCGCGAGGGAGCTGAGGGGTACCTTCCTTTCTGGTAAGACGCGAAGTTATGAATGGAGAGTTTCTCAGTTGAAGGCCCTTTTGAAGTTGGTTGATGATAATGAGCAAGAGATTGTCGATGCATTGCGCTCCGATCTCTCTAAACCCCCTATGGAATCTGTCGTATGCGAGATTGGTTTGTTGAAAAACTCGTGTAAAGTCTCACTTAGGGAACTGAAACATTGGATGAAGCCAGAAAAGGTCAAAACTTCAATCAcaacttttccttcttcagCTGAGATAGTACCAGAACCGCTGGGTGTTGCTTTAGTCATCTCTGCATGGAATTACCCTATATTGTTATCACTTGATCCAGTTGTTGGAGCTATTGCCGCTGGTAATGCTGTGGTTCTGAAACCATCAGAAATTTCTCCAGCCACATCTTCACTGCTGGCAAAGTTATTAGGAAAGTATATGGATAACTCTTGTGTAAGGGTTGTTGAGGGAGCGGCTGATGAAACAACTGCACTACTGCAGCAGAAGtgggacaaaattttctatacaGGCAACGCAAGAATAGGACGCACAGTGATGACTGCTGCTGCAAAACACCTTACACCAGTTGTTCTAGAGCTTGGAGGAAAATCTCCGGCTGTCGTTGattcaaatatcaatataaagGTAGCAAGTAGACGAATAATAGCAGGTAAGTGGGGGTGTAACAATGGGCAAGCTTGCATTTCTCCagattatattataacaaCCAAAGATTATGCTCCCAAGTTGGTCGATGCACTTAAGACTGAATTGGAGACATTTTATGGAAAGAACCCCTTGGAATCAAAAGATTTGTCTCGCATTGTGAATTCTAACCACTTTGGTCGCTTGACAAAGCTTTTGGATGAGGATAAGGTTTCTGGTAAGATCGTTTATGGAGGTGAAAGGGATGAAAGCAAATTGATGATTGCTCCCACTATTCTATTGGATGTTCCTCGAAATTCTCTGATAATGAATGAGGAGATATTTGGTCCCTTACTGCCCATTATCACGGTCGATAAACTGGAAGAAAGCTTTGACGTGATTAATTCAGGAACAAAGCCCCTTGCTGCATATTTATTTACCAACAACAAGAAACTCAAGGAGCAGTTTGCGAAGGGTATTTCTGCTGGGGGTTTGGTTGTCAATGACACTACCTTGCATCTTGCAGTTCATACTTTGCCATTTGGGGGAGTTGGGGAGAGTGGAATTGGTGCATACCATGGGAAATTCTCCTTTGATGCTTTTACCCATAAAAAAGCAGTTTTATATCGCAGTTTTCATGGTGATGCAGCAGTGAGGTACCCTCCATACTCGTACATGAAGCTAAGATTGATGAAGGCCCTGATTGGTGGTAGTATAAATGGTATAATCCGAGCTCTTTTCGGATA 1457 0.4159 MAGEEPKNVFDAEAASSLARELRGTFLSGKTRSYEWRVSQLKALLKLVDDNEQEIVDALRSDLSKPPMESVVCEIGLLKNSCKVSLRELKHWMKPEKVKTSITTFPSSAEIVPEPLGVALVISAWNYPILLSLDPVVGAIAAGNAVVLKPSEISPATSSLLAKLLGKYMDNSCVRVVEGAADETTALLQQKWDKIFYTGNARIGRTVMTAAAKHLTPVVLELGGKSPAVVDSNINIKVASRRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKTELETFYGKNPLESKDLSRIVNSNHFGRLTKLLDEDKVSGKIVYGGERDESKLMIAPTILLDVPRNSLIMNEEIFGPLLPIITVDKLEESFDVINSGTKPLAAYLFTNNKKLKEQFAKGISAGGLVVNDTTLHLAVHTLPFGGVGESGIGAYHGKFSFDAFTHKKAVLYRSFHGDAAVRYPPYSYMKLRLMKALIGGSINGIIRALFG 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02082 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Bva12g02082 485 PANTHER ALDEHYDE DEHYDROGENASE 6 485 - -
Bva12g02082 485 Pfam Aldehyde dehydrogenase family 28 444 IPR015590 GO:0016491
Bva12g02082 485 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 220 227 IPR029510 GO:0016491
Bva12g02082 485 PIRSF ALDH 4 481 IPR012394 GO:0006081
Bva12g02082 485 CDD ALDH_F3FHI 15 446 - -
Bva12g02082 485 SUPERFAMILY ALDH-like 20 461 IPR016161 GO:0016491
Bva12g02082 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 442 IPR016162 GO:0016491
Bva12g02082 485 PANTHER ALDEHYDE DEHYDROGENASE 6 485 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02082 Bva-Chr12 16262798 16266937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02082 75 485 Aldehyde Dehydrogenase Gene Family AT1G44170 74.453 0.0 652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02082 12 16262798 16266937 Bva12g02082 12 16262798 16266937 ECH