Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02077 ATGGCAGCAGAGCTACAGTTACCACCAGGCTTCAGATTCCACCCAACCGATGAGGAGCTCGTGATGCACTATCTCTGCCGTAAATGCGCATCTCAGCCGATTGCCGTTCCGATCATCGCCGAAATCGACCTTTACAAGTACGACCCGTGGGACCTTGCGGGTATGGCCTTGTATGGAGAGAAAGAGTGGTACTTCTTCACCCCTAGGGATAGGAAATATCCGAACGGTAAAGCACctaaaggggaaaaaactAATTGGATTATGCACGAGTATCGTCTCGCCGACGTAGATCGCACCGCTCGCAAAAAGAACAGCCTCAGGCTGGATGACTGGGTGCTCTGCCGTATCTACAACAAGAAGGGCACCATTGAGAAGCAACCAAGCCTTGTTAGTAGGAAAACTGAATATTCTGAGATTGAGGAGGACCAGAAGCCCCAGAATCTGACATGTGGCGGTGTACTTCCTCCACCGCCACCTCAAGCGCCGTCGACCATGACCGATTACATGCACTTTGACAAGTCGGATTCAGTTCCAAAGCTGCACACTGACTCGAGCTGCTCCGAGCATGTGGTGTCGCCGGAGTTCGCAAGCGAGGTGCAGAGCGAACCCAAGTGGAATGAGTGGGAGAAGGACCTTGATTTCTCCTACAATTACCTGGGAGCCACTCTGAATAACAGCTTCGGTCCACAATTCCAGGGCAATAATCAGATGTCGCCGTTGCAAGACATGTTCATGTACTTGCAGAAGCCTCTCTA 755 0.506 MAAELQLPPGFRFHPTDEELVMHYLCRKCASQPIAVPIIAEIDLYKYDPWDLAGMALYGEKEWYFFTPRDRKYPNGKAPKGEKTNWIMHEYRLADVDRTARKKNSLRLDDWVLCRIYNKKGTIEKQPSLVSRKTEYSEIEEDQKPQNLTCGGVLPPPPPQAPSTMTDYMHFDKSDSVPKLHTDSSCSEHVVSPEFASEVQSEPKWNEWEKDLDFSYNYLGATLNNSFGPQFQGNNQMSPLQDMFMYLQKPL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02077 251 PANTHER NAC TRANSCRIPTION FACTOR 56 2 76 - -
Bva12g02077 251 PANTHER NAC TRANSCRIPTION FACTOR 56 76 226 - -
Bva12g02077 251 Pfam No apical meristem (NAM) protein 8 78 IPR003441 GO:0003677|GO:0006355
Bva12g02077 251 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 76 - -
Bva12g02077 251 Gene3D NAC domain 16 77 IPR036093 GO:0003677|GO:0006355
Bva12g02077 251 SUPERFAMILY NAC domain 3 119 IPR036093 GO:0003677|GO:0006355
Bva12g02077 251 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 76 226 - -
Bva12g02077 251 Gene3D NAC domain 78 123 IPR036093 GO:0003677|GO:0006355
Bva12g02077 251 ProSiteProfiles NAC domain profile. 7 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02077 Bva-Chr12 16230543 16232700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02077 1 250 NAC Transcription Factor Family AT1G01720 60.000 2.76e-115 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva12g02077 NAM 2.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02077 - - mnt:21396546 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02077 12 16230543 16232700 Bva12g02077 12 16230543 16232700 ECH