Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02068 aTGTCGACCCAGAATCGTCGTTCGTCGCTTTCGTCCTCAACGACATCATCTCTGGCGAAGCGGCATGCATCGTCGGAGAATGCTGGAAAGGTCATCGCTGTGCCTCCACAAATGACCAAGAAGCGAGCACCTCTCAGTAACCTGACCAATCAAAAGAATGTGGCTCATAGTGCTTCGCGGAACTCAATGCCATCATCTTCTCTGgTACCATGCACGACCAAAATTGCCAAGATAAAGAAGGAGCCCTCTGCATGCACCAGCAACTCAGCAATTTCTGTGAATAAATTACCAGGTTTACCATATGTTAAATCAAGTGCAGCTGCTTTTCCTAAAGTTGCTTCTTTTCCACCAAGGGATGAAGCTGCTCCTACAGTGGCCACTGTCATTGCTCCTGTTTCAAGCAACATGGATGTTTCTCCAAGTAAATCAGATGCCATGTCAGTTTCCATGGATGAGAGCATGTCTACTTGTGATTCTTTCAAGAGTCCCGAAGTTGAATATCTAGATAATAGCGATATTTCAGCTGTTGATTCTATTGATAGAAAGACATTCAGCAGCCTAAATATTTCCGACAACACGGAAAAAGCAGGCAATATATGTAATAGGGACGCACTCGTTGAGTTGGAAAGAGATGACAAAGTTGTGAATGTCGATAGCAATTACATTGATCCACAGCTTTGTGCAACCTTTGCTTGTGATATCTACAACCACTTGCGAGCATCTGAGGTAAAGAAAAGGCCTTCCACAGATTTCATGGAGAAAATTCAGAAGGACATAAATCCCAGTATGCGTGCTATATTGATTGATTGGCTTGTAGAGGTGGCTGAAGAGTATCGGCTTGTTCCTGATACTTTGTATTTGACAGTGAATTACTTAGACCGGTATCTTTCAGGGAATGTGATAACTAGGCAAAAGCTACAATTACTGGGTGTATCCTGCATGATGATTGCCTCTAAATACGAGGAGATTTGTGCACCTCAGGTGGAGGAATTTTGTTACATAACTGACAACACCTACTTCAAAGAAGAGGTTTTGCAAATGGAATCTGCCGTTTTGAATTATCTGAAATTCGAAATGACAGCACCAACAATAAAATGTTTCTTAAGACGATTTGTCAGAGCAGCTCAGGGAGTCAATGAGGTTCCATCATTGCAATTAGAATGCTTAACCAACTACATTGCGGAATTGTCTCTATTGGAGTACAGCATGCTTTGTTATGCACCATCACTAATAGCTGCTTCTGCCATTTTCCTGGCCAAGTTCATACTTTTCCCTTCAAGTAAACCATGGGATTCCACTTTGAAACATTACACACACTACCAGCCTAGTGATTTGTATGCATGCGTAAAGGATCTTCATCGTCTGTGCTACAACAGCCATAGTTCTAATTTTCCCGCAATTCGGGAGAAATACAGTCAGCACAAGTACAAATATGTAGCGAAGAAGTACTGCCCGCCGTCAATACCTCAagaatttttccaaaattg 1487 0.4183 MSTQNRRSSLSSSTTSSLAKRHASSENAGKVIAVPPQMTKKRAPLSNLTNQKNVAHSASRNSMPSSSLVPCTTKIAKIKKEPSACTSNSAISVNKLPGLPYVKSSAAAFPKVASFPPRDEAAPTVATVIAPVSSNMDVSPSKSDAMSVSMDESMSTCDSFKSPEVEYLDNSDISAVDSIDRKTFSSLNISDNTEKAGNICNRDALVELERDDKVVNVDSNYIDPQLCATFACDIYNHLRASEVKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYLDRYLSGNVITRQKLQLLGVSCMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNYLKFEMTAPTIKCFLRRFVRAAQGVNEVPSLQLECLTNYIAELSLLEYSMLCYAPSLIAASAIFLAKFILFPSSKPWDSTLKHYTHYQPSDLYACVKDLHRLCYNSHSSNFPAIREKYSQHKYKYVAKKYCPPSIPQEFFQN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02068 495 Pfam Cyclin, C-terminal domain 362 481 IPR004367 -
Bva12g02068 495 Gene3D - 247 360 - -
Bva12g02068 495 PANTHER CYCLIN-A1-1 30 494 - -
Bva12g02068 495 SMART cyclin_7 366 454 IPR013763 -
Bva12g02068 495 SMART cyclin_7 269 353 IPR013763 -
Bva12g02068 495 CDD CYCLIN 263 352 IPR013763 -
Bva12g02068 495 MobiDBLite consensus disorder prediction 1 23 - -
Bva12g02068 495 Pfam Cyclin, N-terminal domain 233 359 IPR006671 -
Bva12g02068 495 SMART Cyclin_C_2 362 485 IPR004367 -
Bva12g02068 495 ProSitePatterns Cyclins signature. 264 295 IPR006671 -
Bva12g02068 495 PANTHER CYCLINS 30 494 IPR039361 -
Bva12g02068 495 SUPERFAMILY Cyclin-like 223 359 IPR036915 -
Bva12g02068 495 PIRSF Cyclin_A_B_D_E 1 492 IPR039361 -
Bva12g02068 495 Gene3D - 233 481 - -
Bva12g02068 495 MobiDBLite consensus disorder prediction 42 66 - -
Bva12g02068 495 CDD CYCLIN 360 453 IPR013763 -
Bva12g02068 495 SUPERFAMILY Cyclin-like 362 487 IPR036915 -
Bva12g02068 495 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02068 Bva-Chr12 16182729 16186382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02068 4 495 Core Cell Cycle Gene Families AT1G44110 63.508 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02068 K06627 - zju:107421028 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02068 12 16182729 16186382 Bva12g02068 12 16182729 16186382 ECH