Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02058 ATGGGCTCGTGTGGGGACTCGACTATAGTTGACGATGCCTCAGACGAGTCTGTTATTGAGCAGCATTTATGCTCAGAGCTTTCGTTGCAGCCTGTTCCTGGGCCGCAGACCAGTTCAGAATTAGCTTGCAATGCGGTGGACTCAAATATTGACCACTCCATTACGCCTGAGCAGGCTGGTTCTGCAAACTTCATCGATGTTACAGAGCCACCCAGAGATGCGTTGGTGAGTGAATGTGAAAGTGCTGTTTCGAAGCAATTGGATGATGGCTCCACTTGTTTGAAGGGTTGTACTCAAATTAAAGTTTCTAACTCAGAAAGTGAAATGTTATGCTCACATGAAGAGCCTCAAGACAAAGGTAATGGTGAAATGCCATCAGAGTTTATATCGGGGAATGATTCTCCGAATCATTTCATTCAACAGGGTAAACAGAAGGATGAGAAGATCAATATATTCTCCTCCGAAGGAGATATTGTAGCGGTTgtggaaaacaaaaactatgATACTGGTTTACTTCCTGATACTTGCAATCACATAACTGATTCAAGGCATTCTGAAACGTTCTTGGATTCTGAACCCTTGACTGTCTCGCCAGTTGGTTGCAACCAGAAAAGTGAGCTGGAGGAAATTATGAGAGTTGCAGATCCCTTGTTGGAGATTGTGGGTAAATGTGATGCTTTATGTGGCACCGAGGCTGGTTCTTGCAAGCAGATATCCACTCCACAGGGCAGTGAAATGCCCTCTGATGTATTGCATACAGAAATACAGAAATATGGAATGGGTTGCAACAGTCCTTCTGAAGAAAGGGTTAAAGGTTTTGTTGATGTGGCAAATATTAATGATACTCCATCACAGGGATGCCTGAGATCCTCTGAGAGTTCACCTGTAGATTCACCTCATAAGGCTACCCAGTTGGAACAGGGGATTGCTGAGAATGATATGGATCCTTGTGCAGAAGAAGATGCTATAGTCATAGAGCAAAATATTGATgtagcaaaagaaagaaatcttgAAATGATGAACAATATATTGCCATTAGAAGAAAACACCTGTAATTTGAAGGACAGTTCCATAGAGACAACCACCAACTGTACCATTCAAAAaccatttccattttctctggAATCAGATCAGCCAGATGTTTTTGTCAGCAGTAGCTTGTCAAAGGATATGCCTGATCTCCTTGTCAAGGATAATAACTGCTCCATCAGTTCTGGTAGTGCTGCGGACAATTTCGCCCAGACAGATaatgaaggaaaagatattgTGAGAGTTGATTGTATCCCTGAAAGCAAATGTCCTGACATTGTGTCTTTGCCTTCTCGAAGGAACAACCGGAGAAGTAAATCTGGTCGTAAAACACAGACCAAAAGGGCTTTGAGAAAATGCAAGAACAAGGCCAGTGTGCCACACCCAGGTGGGGGTATGAAGATAATCTTAGATGCTACtaggaagaaaagaagctgTTTCTCCAAACCAGCTCGTTCTTCTATTTGGGGATTGCTGGGGAATATTAAACAGTTTTTTGAACAGGGAAATGAGTATCAAGTCAGTGAAGTTATGTGTCAAGGATTGGGGAAGGCTAGAGTTAGCTGTCAAAGTGGCAAAGTGAATGGCAATGGTGCAAGCTCTAGCTCATTGAGTTCAACAAAGAATCCTTGTGTTTCAACTACTCGTGTTCGTCTGAAGATCAAATTGGGGAAAGAAGTAGATTTGAGTTGTTCAAGTGTCTTGGTTCCAGAGGTTGTTGATGGCTTGGCTTCTGCTCCCAACTTGGGTCCTTGTTTGGACAGCCACAAAGTAGCTAGCAATGCTGAAGATCAACTGTTAGAGGATGTCTCTGTTGGAAAGTCTGAATCTCTCAAAACCAACATGGACAAGGATGCTCTTGTTGTGAATGGACAAATTGCTGATAACCATTCAGAAAGAGCTGCAATAATAGAGAAATCTGATGGGGATGTGGAGGAAATTTGTGCTGTTCCTCCAAAGGGAGTGGTTGAAGCATTAAAAGAGCCAGTTAATGATAAGGATATGGATCCTGGAACTTCACCTGATTCAGAAGTTATCAATACAATTCCAGATGTGCAGGTTGGGGAAAGACATAATGAAGATGTGAATGATACAGTTTTAGGTTCTTCTAAGGAGCTTAGTTCCACTGTGGATGTTACTAGGAAcaagagagggaaaaagaaaggcaaGCACTCTCGTATTGTCGAAGATGGATCACAAGGTGCAGTGGTGGCAAGTAGAGCTAAGCATTCAAAGAATCGTGGACGGAGAAAGAATTCTGGTATTGCAGTTTGCTCTGATGAACCTGTTACTTACTCTGCTGATGTTAATGCTACAATCAACCCACCAAGCCGTAAGGAATTATCCATGGAACACTTGCTTGTTTCTGGAGATATTGAACATGCAGCTTCCTCTGAGGCATTGAAAGTGAAAAGTAGTGTGGAAATTGAGACAGTTTGCAGCCCAGCTGTTATTGATAGGCTTTCGGAATCCCATGGTCTTGAGAATGTGTTATCCTCTGCAAAATCTTCAGGGCGAAAACTTCCAAAAAGTCTAAAATCTGGTAAAGTCAGCAAGGCCAAATCTAAATCTTCTGACGCAACAAGTAGGAAAAAGACTGCTTGCAGACACAGGGACAAGCAGCGGAAACCTGTAAATAAGAGTGAAGTCAAGGGAAAAGTTCTCTTTGATCAAGCTGTGAACGAGGCAAAAGATCACCTAAAAGCAGAAAATGGTGTTAATGGAAATCATAAGTTAGATGCTACTGGAAAAATTAATGCTGTTGAAGACTGTGAATGGAATGATGTAGCTAGTTTGGACGTGGTCCCTGGTGTTGGCCTTGGAGAGCAGCATCATTCACTGCCTAATGCATGGGTGCGTTGTGATGATTGTCACAAGTGGCGGCGCATACCTGCTGCACTTGCAGAtcaaattgaagaaacaaaCTGCACTTGGACCTGTAAGGACAGCGAGGATAAAGTCTTTGCTGATTGCTCTATTCCTCAGGAAAAGTCAAATGCTGAGATAAATGCAGAGTTGGGATTGTCAGATGCATCTGGTGAAGAAGATGCTTATGAaggatataaaaattatagggAATTGGAAAATCAACGTGCAATGTTTTCCCAGGAGTCAACTTTTACTCGTATTTATACCAATGAGTTTTTGCATCGCAGTCGCAAAGATCAGACTATTGATGAGATAATGGTTTGTAGTTGCAAACCACCTCTAGCTGGCCAATTGGGATGTGGGGAGGAATGTCTAAACCGGATGCTTAACATTGAATGTGTTCAAGGAACCTGTCCATGCGGGGACCTGTGTTCTAATCAACAGTTCCAGAAACGCGAGTATGCCCAACTGAAGTGGTTTAAATGTGGGAAAAAAGGTTATGGACTGAAGGCAATCAAGCCTATATCTAAAGGACAGTTTCTTACTGAATATGTTGGAGAGGTGCTTGATAATCTTGCTTATGAGAATCGACAAAGAGAGTATGCTTTGAAGGGTCACAGGCATTTCTATTTCATGACCTTGGATAACAGTGAGGTCATAGATGCAAGTGCAAAAGGAAATTTGGGGCGTTTCATAAATCATAGTTGTGATCCTAATTGCCGCACAGAAAAGTGGATGGTGAATGGGGAAATCTGTATTGGACTATTTGCACTAAGGGATATTAAGCAGGATGAAGAGGTTACTTTTGATTACAACTATGTGAGGGTTTTTGGTGCTGCTGCCAAAAAATGTTATTGTGGTTCTCCTCAATGTCGGGGTTATATAGGGGGCGACCCACTTAAATCTGAAGTTATTGTTCAAGGTGATTCAGATGAAGAATTTCCAGAACCTGTGATGCTTACTGAATATGGTGAAGTGGAAGACAGTATTCCTAGCCCCAGTTACTTTAATAACATTGATAAGCAGACTGCTAGGCGCAGGTTCAAAGACAGGAATAGATTGGACAGGTCTATAACTGCTATAAGACAAGATGGTACTcgagagaaagagagttatATAAACCCCAGCTCTGCTATTTCCCAGTTGGACAGCTTATTACAAGTGGAGGACTTAAGTGGGAAGTTACCATCTTCTGTTGATGTGGAGGCAATTTCCCAGCAAATGGAGGATGTAACAAGCAAACCCATGCCCGCTTTAGAAGGATACACATTGGAAGCAGAGCTTGTTGACAAAAACTCCTCCTCGGCTGGAAGATTAGGGGCTTCTTCTGCTACATCTGTCAGCAAATCCTTACCACACTTCACTGATCGGAACAAGGAGTCCAATTCTGAAATAATAGATAGGCATGATTTTTCAGAATCACATCTGCTTAAGAAGACTTCTCGACTAAAAGGTTCTATTAAAAAGGGGAAGGACCGTGGTAATCCTCCAAATGCCCTCAAAGCTGAGGTGAAAGTACCAGTTCCGtctataaaacttaaaaaagtaGTAGAAGGTTCTTCAAATGGCCGCTTTGAAGCAGTTCAAGAGAAACTTAATGAGTTGCTGGATGGAGATGGAGGAATCAGCAAAAGGAAAGATGCCACAAAAGGCTACTTGAAGCTTCTGTTTCTCACTGCAGCTTCAGGTGAAAGGAGTGGTGGCGAAGCAATTCAAAGTAATCGAGATCTTTCCATGATCCTTGATGCCCTTCTGAAAACAAAATCTAGAGCTGTGCTGAAtgatataattaacaaaaatgGCTTACAGATGTTGCATAACATAATGAAGCAGTACAAGCGGGacttcaaaaaaattccaatacTCCGAAAGCTTCTTAAGGTCTTGGAGTACTTAGCAGCAAGTAATATACTGACATTTCAACATATTATTGGCGGTCCACCTTGTCTTGGAATGGAGAGCTTTAGGGAGTCTATGCTGTCTCTGACTGAGCATGATGACAAACAGGTTCATCAAATTGCTCGAAGTTTCCGAGACAGATGGATTCCAAGACCTTACAGAAAACTTGGCTATCTGGACATGGACGATAGTAGGGTGGAGTCTCACAGGAGTCTCAACTGCAATAGAATTTCAGCATTACACAACCATAGGCGTGAGCAGGAAGTAAGACCTACGGAAGCAATAGATTGTGTCCGGCAGTCAATGCTTGTGACAACTTCGGTAGATTCCAGTGCCCAGGATGGCAGCTCTGCATTGTCCCAAGATGGTTGTGAAATCAACGGGACAAAGAAGCGAAAACGTAAGAGCCGATGGGACCAGCCAGCAGAGACAAAATCAGATTCAGTATCTTACCCGTGCAAGGAACAAAAGATTGACTCTGGACTGTTACAGCAAATGGATGCATCTATTAACTGTGCTGATGGAGGACATAACATTCCCGAGGATGTTCCACCAGGGTTTTCATGTCCGCTTCAACCACAGTTTGGTTCATCTAATGCTCTAATAAAGTCCAATGATCTTTCCTTGCCAAATGCCGGTCATTCTGGAAGTCCTTCTGATGCAGTTATTGGGCGTCTGAAGGAGAGATTTGATTCTCGCTTGCCTGTATCATATGGAATGTCCTTGTGTGTCGTCCGGCAACATGGAATAGCTCATGCAGAAATTGCAGAGAGCTGGGTCACTGCGCCAGGCATACCTTTCAACCCTTTTCCGCCTCTGCCCCCATATCCACGGGATAAGAGAGACCTTCAATCTTCTAATTCTACGAATGTTGAGACAATTAATGGGCTTGCCGAAGGCGGGCAACATGATACTGGTGGTCTAGCTAGTTCTTACTCGGATGATATGGTTCCCAGCACAACTGGTTCTAACCTTGAGACCGGAGACTCCTCATTTGAGGACAATAAACATGTTTCTAAACGAGTCAAATGTACCTCGTATGATTTGGGAAAGAGGTACTTCAGGCAACAAAAATGGAATAACTCTAAATCCCTACCTTGGCATAGGAATGTTTGGGGATGTAATGGCAACGACTCTAGTGGTAGTGTGTGCAGTATAGGTGTAGGATGTGTACCGCATGAGTCAAAAACTACATGTTATTCAGAGGATGCAACCTGTAGAGCGGAGAAAGATTTCTTGTCCTTCACTTA 6047 0.4146 MGSCGDSTIVDDASDESVIEQHLCSELSLQPVPGPQTSSELACNAVDSNIDHSITPEQAGSANFIDVTEPPRDALVSECESAVSKQLDDGSTCLKGCTQIKVSNSESEMLCSHEEPQDKGNGEMPSEFISGNDSPNHFIQQGKQKDEKINIFSSEGDIVAVVENKNYDTGLLPDTCNHITDSRHSETFLDSEPLTVSPVGCNQKSELEEIMRVADPLLEIVGKCDALCGTEAGSCKQISTPQGSEMPSDVLHTEIQKYGMGCNSPSEERVKGFVDVANINDTPSQGCLRSSESSPVDSPHKATQLEQGIAENDMDPCAEEDAIVIEQNIDVAKERNLEMMNNILPLEENTCNLKDSSIETTTNCTIQKPFPFSLESDQPDVFVSSSLSKDMPDLLVKDNNCSISSGSAADNFAQTDNEGKDIVRVDCIPESKCPDIVSLPSRRNNRRSKSGRKTQTKRALRKCKNKASVPHPGGGMKIILDATRKKRSCFSKPARSSIWGLLGNIKQFFEQGNEYQVSEVMCQGLGKARVSCQSGKVNGNGASSSSLSSTKNPCVSTTRVRLKIKLGKEVDLSCSSVLVPEVVDGLASAPNLGPCLDSHKVASNAEDQLLEDVSVGKSESLKTNMDKDALVVNGQIADNHSERAAIIEKSDGDVEEICAVPPKGVVEALKEPVNDKDMDPGTSPDSEVINTIPDVQVGERHNEDVNDTVLGSSKELSSTVDVTRNKRGKKKGKHSRIVEDGSQGAVVASRAKHSKNRGRRKNSGIAVCSDEPVTYSADVNATINPPSRKELSMEHLLVSGDIEHAASSEALKVKSSVEIETVCSPAVIDRLSESHGLENVLSSAKSSGRKLPKSLKSGKVSKAKSKSSDATSRKKTACRHRDKQRKPVNKSEVKGKVLFDQAVNEAKDHLKAENGVNGNHKLDATGKINAVEDCEWNDVASLDVVPGVGLGEQHHSLPNAWVRCDDCHKWRRIPAALADQIEETNCTWTCKDSEDKVFADCSIPQEKSNAEINAELGLSDASGEEDAYEGYKNYRELENQRAMFSQESTFTRIYTNEFLHRSRKDQTIDEIMVCSCKPPLAGQLGCGEECLNRMLNIECVQGTCPCGDLCSNQQFQKREYAQLKWFKCGKKGYGLKAIKPISKGQFLTEYVGEVLDNLAYENRQREYALKGHRHFYFMTLDNSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEEVTFDYNYVRVFGAAAKKCYCGSPQCRGYIGGDPLKSEVIVQGDSDEEFPEPVMLTEYGEVEDSIPSPSYFNNIDKQTARRRFKDRNRLDRSITAIRQDGTREKESYINPSSAISQLDSLLQVEDLSGKLPSSVDVEAISQQMEDVTSKPMPALEGYTLEAELVDKNSSSAGRLGASSATSVSKSLPHFTDRNKESNSEIIDRHDFSESHLLKKTSRLKGSIKKGKDRGNPPNALKAEVKVPVPSIKLKKVVEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLFLTAASGERSGGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHNIMKQYKRDFKKIPILRKLLKVLEYLAASNILTFQHIIGGPPCLGMESFRESMLSLTEHDDKQVHQIARSFRDRWIPRPYRKLGYLDMDDSRVESHRSLNCNRISALHNHRREQEVRPTEAIDCVRQSMLVTTSVDSSAQDGSSALSQDGCEINGTKKRKRKSRWDQPAETKSDSVSYPCKEQKIDSGLLQQMDASINCADGGHNIPEDVPPGFSCPLQPQFGSSNALIKSNDLSLPNAGHSGSPSDAVIGRLKERFDSRLPVSYGMSLCVVRQHGIAHAEIAESWVTAPGIPFNPFPPLPPYPRDKRDLQSSNSTNVETINGLAEGGQHDTGGLASSYSDDMVPSTTGSNLETGDSSFEDNKHVSKRVKCTSYDLGKRFLVLHLVKLYTIQQPAVLYIHMSKSKSKPSRDGVQLFWKFLLRYSVKHDLFDLHLNQPNA 2011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02058 2011 ProSiteProfiles AWS domain profile. 1069 1119 IPR006560 GO:0005634|GO:0018024
Bva12g02058 2011 MobiDBLite consensus disorder prediction 1401 1418 - -
Bva12g02058 2011 MobiDBLite consensus disorder prediction 1400 1433 - -
Bva12g02058 2011 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 441 1942 - -
Bva12g02058 2011 Pfam AWS domain 1084 1118 IPR006560 GO:0005634|GO:0018024
Bva12g02058 2011 Pfam CW-type Zinc Finger 961 1007 IPR011124 GO:0008270
Bva12g02058 2011 MobiDBLite consensus disorder prediction 841 893 - -
Bva12g02058 2011 MobiDBLite consensus disorder prediction 439 459 - -
Bva12g02058 2011 MobiDBLite consensus disorder prediction 1707 1750 - -
Bva12g02058 2011 MobiDBLite consensus disorder prediction 445 459 - -
Bva12g02058 2011 Pfam SET domain 1132 1238 IPR001214 GO:0005515
Bva12g02058 2011 MobiDBLite consensus disorder prediction 862 876 - -
Bva12g02058 2011 CDD SET_SETD2 1120 1262 IPR044437 GO:0010452|GO:0046975
Bva12g02058 2011 SMART set_7 1121 1244 IPR001214 GO:0005515
Bva12g02058 2011 MobiDBLite consensus disorder prediction 716 762 - -
Bva12g02058 2011 SMART shorttest3 1069 1120 IPR006560 GO:0005634|GO:0018024
Bva12g02058 2011 SMART PostSET_3 1246 1262 IPR003616 -
Bva12g02058 2011 ProSiteProfiles Post-SET domain profile. 1246 1262 IPR003616 -
Bva12g02058 2011 MobiDBLite consensus disorder prediction 112 143 - -
Bva12g02058 2011 Gene3D - 959 1017 - -
Bva12g02058 2011 ProSiteProfiles SET domain profile. 1121 1238 IPR001214 GO:0005515
Bva12g02058 2011 Gene3D SET domain 1018 1277 IPR046341 -
Bva12g02058 2011 SUPERFAMILY SET domain 1049 1259 IPR046341 -
Bva12g02058 2011 MobiDBLite consensus disorder prediction 1707 1723 - -
Bva12g02058 2011 ProSiteProfiles Zinc finger CW-type profile. 955 1009 IPR011124 GO:0008270
Bva12g02058 2011 PANTHER SET DOMAIN PROTEINS 441 1942 - -
Bva12g02058 2011 MobiDBLite consensus disorder prediction 1419 1433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02058 Bva-Chr12 16109606 16121946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02058 1104 1261 C2H2 Transcription Factor Family AT2G23740 32.597 8.30e-19 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva12g02058 SET 1.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02058 - - gmx:100795379 2011.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02058 12 16109606 16121946 Bva12g02058 12 16109606 16121946 ECH