Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02057 ATGATGAAAATGTTGCAAGCTGGTTCCGCCGCCATAGAGAGAAACTCCAGTGGCCGGACGGTGGTCGTGGGAGTCAATTTGGACTCGCCAAGCAGAGAGTTGCTCACATGGGCTTTGGTCAAAGTTGCTCAGCCTGGTGATAATGTGGTGGCTCTTCATGTTCTTGGGAATGATGAAATTGTGAATCGAGATGGGAAAGCGTCGTTTCTTTCGCTTGTCAAAGCATTTGATTCTGTTCTTGCTGTTTACGAAGGTTTCTGCAATTTAAAACAGGTGGATCTCAAGCTCAAAATTTGCAGAGGTTCATCAGTTCAAAAAATTCTAGTTCGAGAAGCTAATGCTTATTCTGCTACTCATCTTATAGTAGGAACTGGTGAAGGCCTCCACAAAATTCGGCCATCGACCTCTGTAGCTAAGTATTGTGCCAAAAAGCTACCCAGGGATTGCTCTGTTCTTGCCGTTAATAATGGAAAAGTTGTGTTTAAGAGAGATGGCTCACCAGCGACTCTTGCTGACTTAGAAGGAAATGAGCATCATCACAGAAACGGGTTGATTGCTTCAATTCAAAGGACATTCAGTAAGAGTTCCAAAGTACTAAATGATGACAATACAGGGTCGCATGAGAAAGGTTCTGGCCAAAATTCAGATCACAGCTTAGCTAAGATTTTTCTGGATTCTACAGAAACCTTTCAGAAAAAGAGCTGCTCAATCTGTGCTCCAACCTCTGGATTGTCAACTACTTCTTGCAACCAATGTGCAGAAGAATCTCCTGGCGATGGTGATGATGAGAACCCTTTGGCTATAGTACCTGTACAGAATGCTGAGGCAGCATCAAGTACAACGACTTTGTCTGTCAGAGAACTACCTGAACTTAAACCAGGTTGGCCACTACTGCACAGGACAATTTTATCTGACAGACAATCTACTGGTAGATCATTGGTGCGCGAGATCTCTGTGGTTCAATGGGCAATGCGGTTACCCAGTAGAAATGTAGATCGTGACCACAAACAAAGCAATTGCGATCAAGGTCAAGGTCAATCTTTGGGTTTAGACAGCGAAAGTGGTGCTATTGTTCCAGTGGATATTGAAATAGGGACTGCTTCTTCTTCACCTGATCACAATTCAAGGAGCATTCCTAAAGAATTGGAGGGTCTTCATGAGAGATACTCATCGACATGCAGAATGTTTAAGTACCAAGAACTGGCATTAGCGACGTCAAATTTCTTGCCTGAAAATTTGATTGGGAAAGGAGGAAGTAGTAGAGTTTACAGAGGCTGCCTTCCTGACGGCAAGGAACTGGCGGTTAAGATTTTAAAGCCTTCTGATGACGTTTTAAAAGAGTTTGTTctagaaatagaaattattacTACCTTGCATCACAAAAACATTATTTCTCTCCTGGGGTTCTGCTTTGAGGATGACAATCTTCTTTTGGTCTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAACCTTCATGGGAGTAAGAAAAACCCAAATGTATTTGGTTGGGCTGAGAGATATAAGGTGGCGGAGGGTGTTGCTGAGGCTCTTGATTATTTACATAATATGGGTGCTCAGCATGCGATCCATAGGGATGTCAAATCATCAAATGTATTATTATCTGAGGATTTTGAACCCCAGCTCTCTGATTTCGGACTTGCTAAATGGGCGTCAACCTCATCTTCACATATAACCTGCACAGATGTTGCTGGAACCTTTGGTTACATGGCTCCTGAGTACTTCATGTATGGGAAAGTAAATGATAAGATCGATGTCTATGCCTTTGGAGTTGTGCTCCTTGAGCTTCTTTCGGGAAGAAAGGCCATAGGTGGTGATTATCCGAAAGGTCAAGAGAGCGTCGTCATGTGGGCAAGTCCTATTCTAAATAGGGGGAAGATATCACAATTGTTAGATCCAGATTTAGGTAATAACTATGATCAGGACCAGATGGAAAGGATGATATTGGCAGCCACACTTTGTGTCAGACGTGCTCCACGAGCTAGACCTCAAATGAGCGTTATTTCTCAGCTCCTTAGAGGTGATGCTGATGCAATCAAATGGGCAAGGCTAGAAGTTAACGCTTCTGAGGCACCGGAAATTGTTGATGATGAAGCTTGCCCACCGTCAAATCTACAGTCACATCTCAATCTTGCACTGCTTGATGTGGAGGATGACTCACTCTCCTTGTGCAGTATTGTGCAGAATGTCTCGTTAGAAGACTACCTCAGAGGCAGATGGAGCCGCTCATCAAGCTTTGACTG 2264 0.4315 MMKMLQAGSAAIERNSSGRTVVVGVNLDSPSRELLTWALVKVAQPGDNVVALHVLGNDEIVNRDGKASFLSLVKAFDSVLAVYEGFCNLKQVDLKLKICRGSSVQKILVREANAYSATHLIVGTGEGLHKIRPSTSVAKYCAKKLPRDCSVLAVNNGKVVFKRDGSPATLADLEGNEHHHRNGLIASIQRTFSKSSKVLNDDNTGSHEKGSGQNSDHSLAKIFLDSTETFQKKSCSICAPTSGLSTTSCNQCAEESPGDGDDENPLAIVPVQNAEAASSTTTLSVRELPELKPGWPLLHRTILSDRQSTGRSLVREISVVQWAMRLPSRNVDRDHKQSNCDQGQGQSLGLDSESGAIVPVDIEIGTASSSPDHNSRSIPKELEGLHERYSSTCRMFKYQELALATSNFLPENLIGKGGSSRVYRGCLPDGKELAVKILKPSDDVLKEFVLEIEIITTLHHKNIISLLGFCFEDDNLLLVYDFLSRGSLEENLHGSKKNPNVFGWAERYKVAEGVAEALDYLHNMGAQHAIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYMAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKAIGGDYPKGQESVVMWASPILNRGKISQLLDPDLGNNYDQDQMERMILAATLCVRRAPRARPQMSVISQLLRGDADAIKWARLEVNASEAPEIVDDEACPPSNLQSHLNLALLDVEDDSLSLCSIVQNVSLEDYLRGRWSRSSSFD 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02057 754 CDD USP_Like 20 154 - -
Bva12g02057 754 ProSiteProfiles Protein kinase domain profile. 408 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02057 754 SUPERFAMILY Protein kinase-like (PK-like) 390 681 IPR011009 -
Bva12g02057 754 PANTHER - 12 737 - -
Bva12g02057 754 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 155 - -
Bva12g02057 754 Pfam Universal stress protein family 19 154 IPR006016 -
Bva12g02057 754 Pfam Protein kinase domain 412 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02057 754 Gene3D HUPs 18 156 IPR014729 -
Bva12g02057 754 Gene3D Transferase(Phosphotransferase) domain 1 483 697 - -
Bva12g02057 754 SMART serkin_6 408 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02057 754 Gene3D Phosphorylase Kinase; domain 1 372 482 - -
Bva12g02057 754 ProSitePatterns Protein kinases ATP-binding region signature. 414 436 IPR017441 GO:0005524
Bva12g02057 754 PANTHER OS08G0249100 PROTEIN 12 737 - -
Bva12g02057 754 MobiDBLite consensus disorder prediction 197 217 - -
Bva12g02057 754 MobiDBLite consensus disorder prediction 331 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02057 Bva-Chr12 16099890 16103954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02057 395 678 Trihelix Transcription Factor Family AT1G68690 46.021 2.45e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bva12g02057 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02057 - - aprc:113846853 1172.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02057 12 16099890 16103954 Bva12g02057 12 16099890 16103954 ECH