Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02050 ATGCCCCCCCGTCGGTGCACAGCGGCGAGGCACAGTTCCGATTACGATTCGGATAATAGTTACAGTGATTACGATTACGACAACACAACAATGCGGTGTATCTCATGCGAGGAGGACTACGACCCAGACGACGCCGGCACCTGCAAGGTGTGCTACGAGGAAGCTAACGAGACCGAGGAGGAGCTCAAGAGAGAGATCGATGACTTAAAGGCCAAAGTTGCTTTCCTAAAGCTCTTGTCTCCGGCCGATCACCATCACCGATTTTATGGTCCCACCTCCACCGACGTCGTTTTGGTTGCCTCCGATGATGGTCCTGGTGGGCCCGCCGTGCCGGTTCCTGCTCATAAGGCTGTTCTGGTTAGTCGCTCCCCAGTTTTCAAAGCAATGCTGGAGAATGATATGGAGGAAAGCCGGAGTGGCACTATCAAGATCAGTGATGTATCATATGATGCTCTTCGTGCCTTTGTTAACTATTTATACACAGCGGAAGCATGCCTTGACGATCAAATGGCTTGCGACCTATTAGTATTAGCTGAAAAATATCAAGTGAAGCATCTTAAGGCTTTCTGTGAGAAGTTTTTGGTGGCTAAATTGAACTGGGACAAATCTGTCGTGAACTATGCCTTTGCATACCGACACAACGCCAACCATTTACTTGAAGCAGCCTTGGTATTGATCACAGATAACATCGACAACCTTACTAAAAATGAGGACTACAAGGAACTTGTGGAGAGTAATCCTCGTCTTGTGGTGGAAATCTATGAAGCTTACCTCAAAAAACAGGTCAATACCGCAGCCTCAAAGGATTCTTCCATTAAGCATTA 824 0.4745 MPPRRCTAARHSSDYDSDNSYSDYDYDNTTMRCISCEEDYDPDDAGTCKVCYEEANETEEELKREIDDLKAKVAFLKLLSPADHHHRFYGPTSTDVVLVASDDGPGGPAVPVPAHKAVLVSRSPVFKAMLENDMEESRSGTIKISDVSYDALRAFVNYLYTAEACLDDQMACDLLVLAEKYQVKHLKAFCEKFLVAKLNWDKSVVNYAFAYRHNANHLLEAALVLITDNIDNLTKNEDYKELVESNPRLVVEIYEAYLKKQVNTAASKDSSIKH 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02050 274 PANTHER GH01369P 28 270 - -
Bva12g02050 274 PANTHER SPECKLE-TYPE POZ PROTEIN 28 270 - -
Bva12g02050 274 MobiDBLite consensus disorder prediction 1 20 - -
Bva12g02050 274 Coils Coil 52 79 - -
Bva12g02050 274 Gene3D Potassium Channel Kv1.1; Chain A 75 198 IPR011333 -
Bva12g02050 274 Gene3D - 199 274 - -
Bva12g02050 274 SUPERFAMILY POZ domain 86 195 IPR011333 -
Bva12g02050 274 SMART BTB_4 94 198 IPR000210 GO:0005515
Bva12g02050 274 Pfam BTB/POZ domain 93 197 IPR000210 GO:0005515
Bva12g02050 274 CDD BTB_POZ_ZBTB_KLHL-like 94 181 - -
Bva12g02050 274 ProSiteProfiles BTB domain profile. 94 168 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02050 Bva-Chr12 16065978 16068397 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva12g02050 BTB 1.7e-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02050 K10523 - cit:102628895 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02050 12 16065978 16068397 Bva12g02050 12 16065978 16068397 ECH