Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02045 ATGGTTGCAGACAAAAAGCAACAACTCATCCCACTATTGCTGGCTATTTTATTAGCAGCAGAAGTAGTGGCAGGTCAATCCAAGCCAGGTTGCCCGGTGAATTGTGGCTCCGTAAGCATACCTTACCCATTTGGCACTAGAGAAGGGTGTTACTTGGATGAATCTTTTCTCATCACTTGCCGAGAGAATTCCAGCAGCAGCATCCCATTCCTGGGACATAGTAATGTAAGCATAGTGGACATATCACTGCAAGATGGTGAATTGCGCATTCCAACATCAGTAGCCCATGATTGTTACAATCACACAGGCTTTCTTCTCAACAGCAGTTACTCCTTGTTCGATTTGCCACACTTTTCAGTCTCGTCCACCCGCAATGAACTCACAACCATTGGTTGTGACACAGTTGGAATAGTTTTTGGGTGGGATTATGAGGGCAAAAACTACACAACAGGTTGTGTATCTCTCTGTAACAAGCTTGATGATATCGAGGAAAATGGCTCTTGCTCTGGCACTGGCTGCTGCCAGGCTCCTGTACCACAACAAGGGCTAAAGGGTTCGTTTTGGATGACTCTAGCTACAGACAACCACACCCGCATAGACAACTTCAATCCATGTGGTTATGCATTTTTTGCCGAACAAGGAACTTATAACTTCTCGCCAACAGATCTTGTGAATTTCCGCCACACAAGCTTTGCTGCTGTGGTTGATTGGGCAGTGGCAAATCAGACTTGTCAACAAGCCCAAAATGATCCTGCAACCTACGCCTGCGTAGCAAAGAACAGTGAATGTATAAAGTCAAACGACGGAGCCGGGTACCGCTGCAAGTGCTCCTCCGGTTTTTGGGGCAATCCATACCTCGTAGATGGTTGTCAAGatatagATGAATGTGTGGAATCTGATCCCTGCAATGGAACATGCCTCAACTCTGTTGGGGGCTTCAAGTGTTTATGTCCGGAGGGTTATGAAGGAGATGGGCTGAAGAGTAATGGAACAGGTTGCGTTCTTAAAGACAATAGCAATTCCATGATAAATATCTTACTCCTAATTATATTGAGTGTGACTGTTAGTTTCTTGGTACTACTTGTGATAAGCTTCTATATTTATTGGGGTtcgaagaaaagaaagataatcaAACAGAGAGAGAAGTTTTTTCAACAGAATGGAGGGATATTGTTACAGCAAAGAATTGCCAACCATAGAGGGTCTGTTGAAACAGccaaaatatttacaattgaAGAGCTAAAGATAGCCACCAACAACtttgaagaaaagagagttATAGGCCAAGGAGGCTATGGAACAGTTTATAAAGGAGTAATACCAAATAATACAATCGTTGCAATCAAGAAGTCCAACATTAGTGATCGCAGCCAAATTGAGCAATTCATCAATGAGGTCACAGTGCTTTCTCAAATCAACCACAGGAATGTTGTTAAGCTTTTAGGTTGTTGTTTAGAGACAGAAGTTCCCTTGCTTGTTTATGAATATACAAGCAATGGATGTCTTTCTAGCTACATTCATTGTGAAATTCAATCATGCAAGCTTTCATGGGCAATGCGTTTGAGAATAGCAACAGAAACTGCAGGGGCCTTGGCATATTTGCACTCTGCCACTTCTATACCAATAATACACAGAGATGTGAAGCCCACCAATATACTACTAGATCATAATCTTACTGCAAAAGTTTCTGATTTTGGGGCTTCAAGGTTTGTTCCTCTTGATCAATCTCAATTGACCACTCTAGTACAGGGGACATGGGGTTACCTTGATCCTGAATATGTCCAAACAAGCCAGCTAACCGAGAAGAGCGATGTTTATAGCTTTGGGGTGGTCTTAGCGGAGTTTCTGACAGGTATGAAAGCACTTTCTTTTGAAAGGCCAGAGAGTCATAGAAACCTGTCaatgtattttgtttcttcGTTGAGAGAGGGACGCTTGCTTCAAATTGTAGACAAGCACATACTAGACGAGGCAAATATTGAGCAAATAATGGAGGTTGCTAATCTCGTGGAACTGTGTTTAAGAGTAAAGGGGGAGGGAAGACCCACCATGAAAGAAGTAGCAATGGAGCTAGAGGGACTAAGAACCATGGGAAGGCATGCATGGGGAGGATCCAATGAATCATTGGAAGAGACTGAGTACTTGCTCAATGCAAATGCAAGAAACCCCGCTGCTATGATGTATAGCATAAACCAGATTTCAACTACATTAGAATATAGTGGAAGATG 2228 0.4161 MVADKKQQLIPLLLAILLAAEVVAGQSKPGCPVNCGSVSIPYPFGTREGCYLDESFLITCRENSSSSIPFLGHSNVSIVDISLQDGELRIPTSVAHDCYNHTGFLLNSSYSLFDLPHFSVSSTRNELTTIGCDTVGIVFGWDYEGKNYTTGCVSLCNKLDDIEENGSCSGTGCCQAPVPQQGLKGSFWMTLATDNHTRIDNFNPCGYAFFAEQGTYNFSPTDLVNFRHTSFAAVVDWAVANQTCQQAQNDPATYACVAKNSECIKSNDGAGYRCKCSSGFWGNPYLVDGCQDIDECVESDPCNGTCLNSVGGFKCLCPEGYEGDGLKSNGTGCVLKDNSNSMINILLLIILSVTVSFLVLLVISFYIYWGSKKRKIIKQREKFFQQNGGILLQQRIANHRGSVETAKIFTIEELKIATNNFEEKRVIGQGGYGTVYKGVIPNNTIVAIKKSNISDRSQIEQFINEVTVLSQINHRNVVKLLGCCLETEVPLLVYEYTSNGCLSSYIHCEIQSCKLSWAMRLRIATETAGALAYLHSATSIPIIHRDVKPTNILLDHNLTAKVSDFGASRFVPLDQSQLTTLVQGTWGYLDPEYVQTSQLTEKSDVYSFGVVLAEFLTGMKALSFERPESHRNLSMYFVSSLREGRLLQIVDKHILDEANIEQIMEVANLVELCLRVKGEGRPTMKEVAMELEGLRTMGRHAWGGSNESLEETEYLLNANARNPAAMMYSINQISTTLEYSGR 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02045 742 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 18 725 - -
Bva12g02045 742 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 306 317 IPR000152 -
Bva12g02045 742 Pfam Wall-associated receptor kinase galacturonan-binding 31 90 IPR025287 GO:0030247
Bva12g02045 742 Gene3D Phosphorylase Kinase; domain 1 393 496 - -
Bva12g02045 742 SUPERFAMILY Protein kinase-like (PK-like) 405 689 IPR011009 -
Bva12g02045 742 ProSitePatterns Protein kinases ATP-binding region signature. 427 450 IPR017441 GO:0005524
Bva12g02045 742 Pfam Calcium-binding EGF domain 292 330 IPR001881 GO:0005509
Bva12g02045 742 Pfam Protein kinase domain 421 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02045 742 CDD EGF_CA 292 324 - -
Bva12g02045 742 SMART serkin_6 421 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02045 742 SMART egfca_6 292 334 IPR001881 GO:0005509
Bva12g02045 742 ProSiteProfiles Protein kinase domain profile. 421 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02045 742 ProSiteProfiles EGF-like domain profile. 292 324 IPR000742 -
Bva12g02045 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Bva12g02045 742 SMART egf_5 243 291 IPR000742 -
Bva12g02045 742 SMART egf_5 295 334 IPR000742 -
Bva12g02045 742 CDD STKc_IRAK 427 694 - -
Bva12g02045 742 ProSitePatterns Calcium-binding EGF-like domain signature. 292 315 IPR018097 GO:0005509
Bva12g02045 742 Gene3D Laminin 240 326 - -
Bva12g02045 742 SUPERFAMILY EGF/Laminin 292 325 - -
Bva12g02045 742 Gene3D Transferase(Phosphotransferase) domain 1 497 710 - -
Bva12g02045 742 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 725 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02045 Bva-Chr12 16026771 16029421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02045 12 716 Receptor kinase-like Gene Family AT1G21230 46.961 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bva12g02045 Pkinase 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02045 - - gmx:100798027 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02045 12 16026771 16029421 Bva12g02045 12 16026771 16029421 ECH