Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02044 ATGTTGGTCCAGCAATTTCTGGTATATCTCTTAACAGCAAAAGTGGCATCACAATCACAGGACCCCAACTCCTCAAATTGCACAAGAAAATGTGGCTCTGTTAGTATCCCTTACCCATTTGGCACAACAGCTGACTGTTCCCTCGATGACCCCTTTCTCATCACTTGCGACCAAAGTTCCAGCACTCCCACCCCTTTGCTGCAAGCAGACAACAAAACTGTCCTCGATATATCACTAGACGGTGAACTGCGGATTTCACACACCACATCCCAAGATTGTTACGACGACCGAGGCCAGCCCACCAACAGCAGCAGCTATTCCATGCTCCAATTGTCACACTTCTCCATCTCCTCTGGCCGCAACAAATTCGTTCAACTTGGTTGTGACACAAACGCAGACCTTTTCGGCTGGCATTTACAACCAGACAGACTTACCTATTACATTGGAATCTCTTCTTTTTGCATCTCAGCTGATCAAGTCCCTAATAAATCTTGCAATGGCTTTGGCTGTAGCGAGAAAATTATATCAGAAGGAGGATTACGCGCTATCCTTTTCAATGCTGATAGCATGAAGAACCATACTGAAGTACGAGACTTCAATCCTTGTGGTCATGCATTTGTCGTTGAAGATAAGGCATACAACTTCTCCTTTACAGATCTTTCGGATTTCAACAGGAAGACAGTCCCTATTGTGCTAGATTGGGCAGTGGGTGATCAGACATGCCAAGAAGCCAAACCGGGAGTTGGGTTTGCTTGTAAGGCAGAGCACAGTGAATGTTTCGATGCAAAAAACGGAATTGGATATCTTTGCAAGTGCTCCTCTGGTTTTCGGGGCAACCCCTACCTCCTTCTTGGCTGCGTTGGTATAGTTGCTTTTACTTTCCTTCTCCATTCTTGTTCCACagcaacaaatattttaaattgcgGTATATTGCTACAACGCCATTATTCTGTTTTCTCTGCAGGCGTGACCATATGCCTATTGATACTACTTGTTGGAAGCGTTTTTGTATACTTGGagttgaagaagagaaagctaATCGCATTCAGAAAACAAGCATTTCAAAAAAATGGTGGTATATTGCTACAACAACAAATAGCCAAAGACAAAGATTTAGTTGAAACAGCGAAAATATTTACTGAAAAAGAGCTTAGAAAAGCCACCAACAATTTTGATGAGAGCATGGTGTTAGGCCAAGGGGGAACTGGAACAGTTTACAGAGGAGTATTATCAGATAATAAAGTGGTTGCTATAAAGAAATCCAAAATTGTTGACCAGAAGCCGGTTGTACAATTCATCAATGAAGTGATTGTGCTTTCCCAAATCAACCATCGGAACGTGGTGAAGCTTTTGGGTTGTTGTTTGGAAACACAAGTTCCCTTGCTTGTTTATGAATTTGTTACAAATGGGACTCTTTCTGACCACCTTCACAACGAAAGTCAATCATGTCAACTTTCATGGACAATTCGTTTGAGAGTGGCAACAGAAACTGCAGGAGCCTTGGCATACTTGCACTCTGCTACTTCTACACCAATCATACACAGAGATGTGAAGAccacaaatatattattagatgATAACCTCATTGCCAAAGTTTCTGACTTCGGAGCTTCAAAGCTTGTTCCTCTCAATAAAACCCAAGTAACCACTTTGGTACAAGGAACACTTGGCTATCTTGATCCGGAATATTTTCAAACAAGCAAACTAACAGAGAAAagtgatgtttatagttttggtgTTGTTCTAACAGAGTTACTGACAAGCAAGAAGGCGCTTAGTTTTGAGAGGCCAGAGAATGAAAGAAATCTAGCAACGCACTTCGTCTCTTCAATTAGAGAAGGTTGTTTACTTCAAATTCTGGATAACTCTCTGGTCAACCATAAAAATACTCGGCAACTAAAGGAAGTGGCTAATCTTGCCGAAGAGTGTTTAAGGGTAAAAGGGGAGGAAAGACCTACCATGAAAGAAGTAGCATTGGAGCTAGAGAGAATAAGAATCATGGATACCGATCCATGGGAACGAGATTATTGGCCTTCACGGATTAgacttttagttaaaaaatacttttctgATAAAAGAATGtacttttg 2090 0.3976 MLVQQFLVYLLTAKVASQSQDPNSSNCTRKCGSVSIPYPFGTTADCSLDDPFLITCDQSSSTPTPLLQADNKTVLDISLDGELRISHTTSQDCYDDRGQPTNSSSYSMLQLSHFSISSGRNKFVQLGCDTNADLFGWHLQPDRLTYYIGISSFCISADQVPNKSCNGFGCSEKIISEGGLRAILFNADSMKNHTEVRDFNPCGHAFVVEDKAYNFSFTDLSDFNRKTVPIVLDWAVGDQTCQEAKPGVGFACKAEHSECFDAKNGIGYLCKCSSGFRGNPYLLLGCVGIVAFTFLLHSCSTATNILNCGILLQRHYSVFSAGVTICLLILLVGSVFVYLELKKRKLIAFRKQAFQKNGGILLQQQIAKDKDLVETAKIFTEKELRKATNNFDESMVLGQGGTGTVYRGVLSDNKVVAIKKSKIVDQKPVVQFINEVIVLSQINHRNVVKLLGCCLETQVPLLVYEFVTNGTLSDHLHNESQSCQLSWTIRLRVATETAGALAYLHSATSTPIIHRDVKTTNILLDDNLIAKVSDFGASKLVPLNKTQVTTLVQGTLGYLDPEYFQTSKLTEKSDVYSFGVVLTELLTSKKALSFERPENERNLATHFVSSIREGCLLQILDNSLVNHKNTRQLKEVANLAEECLRVKGEERPTMKEVALELERIRIMDTDPWERDYWPSRIRLLVKKYFSDKRMYF 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02044 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Bva12g02044 696 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 674 IPR045274 GO:0007166
Bva12g02044 696 Pfam Wall-associated receptor kinase galacturonan-binding 27 84 IPR025287 GO:0030247
Bva12g02044 696 SUPERFAMILY Protein kinase-like (PK-like) 375 687 IPR011009 -
Bva12g02044 696 CDD STKc_IRAK 397 664 - -
Bva12g02044 696 Gene3D Transferase(Phosphotransferase) domain 1 467 674 - -
Bva12g02044 696 SMART serkin_6 391 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02044 696 Pfam Protein kinase domain 393 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02044 696 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 20 674 - -
Bva12g02044 696 Gene3D Phosphorylase Kinase; domain 1 362 466 - -
Bva12g02044 696 ProSitePatterns Protein kinases ATP-binding region signature. 397 420 IPR017441 GO:0005524
Bva12g02044 696 ProSiteProfiles Protein kinase domain profile. 391 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02044 Bva-Chr12 16023571 16026067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02044 1 685 Receptor kinase-like Gene Family AT1G21230 44.491 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Bva12g02044 Pkinase 6.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02044 - - gmx:100798027 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02044 12 16023571 16026067 Bva12g02044 12 16023571 16026067 ECH