Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02035 ATGACTTCTCAGATCGTCAAAaggcaaaataattttggctTTCTACCAAATTCTTCAGATGCACCAATTCTTTGTTCTGGCTGTGGCACAAGGACTCAGTTGTATGCCATGGACTCAATGAGGTTCAGCTATTCTGACATACTGCTTGCAACGAATGAATTTTCAGAGAATAACTTATTAGGTGAAGGTGGATATGGACATGTATACAAGGGTGTGCTTAGAGATGGACAGCAAATTGCAGCAAACGTCAGGAAAGAAGAGAGTGGACAGGGTTTTACTGAATTCCAGTCAGAGGTTTATGTCTTAAGTTTTGCTAAACACAAGAACATAGTGATGTTGTTGGGTCACTGTtgcaaggaaaggaaaaatatacttgtatatgaatatatttgcAATAAGTCTCTTCACTGGCATTTATATGataagAATGCGGCAGTTCTTAACTGGCACCAAAGATATGCTATTGCTATTGGAACTGCAAAGGGATTGCGTTTTCTACATGAGGAATGCCGTGGTAGTCCTATTATTCATCGGGACATGCGACCTAGCAACATACTTCTCACCCATGATTTTGTTCCAatgCTAGGTGATTTTGGCCTTGCCAAATGGAAGACTGGTGACAGTGATGGGCATACAAGGATTTTGGGCACGTTAGGGTACCTTGCTCCTGAGTATGCTGAAGAAGGTATTATTTCTGTGCGGACAGATGTGTTTGCTTATGGCGTTGTTCTATTACAGTTGATATCAGGACGCAAGTTGGTTGATTCCAAGAACCCAGATCGCCAACGTCCTCTTCGACAATGGGCTGAGCCATTGATTGAGAAGTTGACTTTGCATGAACTAATTGACCCTCGTCTTGGGGAGTCATATGACACGTACGAACTATATCTCATGGCCAAAGCAGCATACTACTGTGTGCAAAGAGACCCTGTGAGGCGGCCAACAATGGCGGAGGTTGTGCTTCTtcttgaaggagaaaaagacCACTTCATGAGCTTAtg 1001 0.3976 MTSQIVKRQNNFGFLPNSSDAPILCSGCGTRTQLYAMDSMRFSYSDILLATNEFSENNLLGEGGYGHVYKGVLRDGQQIAANVRKEESGQGFTEFQSEVYVLSFAKHKNIVMLLGHCCKERKNILVYEYICNKSLHWHLYDKNAAVLNWHQRYAIAIGTAKGLRFLHEECRGSPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGDSDGHTRILGTLGYLAPEYAEEGIISVRTDVFAYGVVLLQLISGRKLVDSKNPDRQRPLRQWAEPLIEKLTLHELIDPRLGESYDTYELYLMAKAAYYCVQRDPVRRPTMAEVVLLLEGEKDHFMSL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02035 333 Gene3D Transferase(Phosphotransferase) domain 1 130 331 - -
Bva12g02035 333 PIRSF ILK 38 332 - -
Bva12g02035 333 SUPERFAMILY Protein kinase-like (PK-like) 35 323 IPR011009 -
Bva12g02035 333 ProSiteProfiles Protein kinase domain profile. 54 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g02035 333 PANTHER OS01G0253100 PROTEIN 15 331 IPR045271 GO:0004714|GO:0006468
Bva12g02035 333 ProSitePatterns Tyrosine protein kinases specific active-site signature. 175 187 IPR008266 GO:0004672|GO:0006468
Bva12g02035 333 Gene3D Phosphorylase Kinase; domain 1 25 129 - -
Bva12g02035 333 PANTHER RECEPTOR-LIKE KINASE 15 331 - -
Bva12g02035 333 Pfam Protein kinase domain 55 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02035 Bva-Chr12 15994580 15998792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02035 42 324 Trihelix Transcription Factor Family AT5G38560 45.172 9.02e-83 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Bva12g02035 Pkinase 5.7e-39 CL0016