Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02028 ATGGGTTGGGGAAGAGGCAGTGCAGCTCAAACTGGGGTGATCGCGGTTACGCTACTGGTATGCCTTTTGGTTAAACAGGAACACGTTAATGCAGCAGTTTACACAGTTGGAGGCCCTTCGGGTTGGACCTATAACACTGATACATGGCCCAATGGAAAAAGGTTTAGAGTTGGCGATGTGCTGAtTTTCAAATACGATCCAACAAGCCACAACGTGGTTGCCGTGGACAGAAATGGTTACGAGAGTTGCAGTGCTCCGGGTGGTGCCAAAGTTTTTAGATCAGGGAAGGATCAAATACAGCTAGCAAGTGGACTGAACTACTTTATATGCAACTATCCAGGCCACTGCCAATCTGGGATGAAAATTGCCATCAAAGCCCTCTG 383 0.4778 MGWGRGSAAQTGVIAVTLLVCLLVKQEHVNAAVYTVGGPSGWTYNTDTWPNGKRFRVGDVLIFKYDPTSHNVVAVDRNGYESCSAPGGAKVFRSGKDQIQLASGLNYFICNYPGHCQSGMKIAIKAL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02028 127 ProSiteProfiles Phytocyanin domain profile. 32 127 IPR003245 GO:0009055
Bva12g02028 127 PANTHER BASIC BLUE-LIKE PROTEIN 5 125 - -
Bva12g02028 127 CDD Plantacyanin 32 126 IPR041844 -
Bva12g02028 127 Pfam Plastocyanin-like domain 43 120 IPR003245 GO:0009055
Bva12g02028 127 ProSitePatterns Type-1 copper (blue) proteins signature. 104 120 IPR028871 -
Bva12g02028 127 SUPERFAMILY Cupredoxins 32 126 IPR008972 -
Bva12g02028 127 Gene3D - 30 127 IPR008972 -
Bva12g02028 127 PANTHER BLUE COPPER PROTEIN 5 125 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02028 Bva-Chr12 15955494 15956210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02028 9 127 Phytocyanin Superfamily AT1G17800 46.032 5.60e-28 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02028 - - gmx:100788635 193.741