Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02026 ATGTCTTTATCAGCAGAACTGAATACTTCATCATATAGAAATGCCAAGCTCTACTCACTTAAAGGAACTGATGTTGGGTCGGGCTTGTCTTCCCAAATTTTTTGTCCTGATAAGCACAGAACGATGTACATGGCAGATTCTTACAGCAGTGAGAGTTATGAGAAGTACTTTCTTGATTCACCAACAGAGGAACTGATAGAACCATCCAGTTCTGGCGTCTCTGGAAATTCATTTAACCCAGATGGTGCCTCTTCCTACCAGCTGAGAGCTAGTCCAGGTGCTTCCATGGGTGCCCATAACCCATTTGATGCTTCTTTCATGTCCATGAGACATCGTGATGTATCCAATTTTGGCTCAGATTCCCTGGAAAGTCTGAGCCCAGGTCCACTTGACTTTGATGGTCCAATGAGACTAAAGTTACAGGAGTTGGAGAGGGAACTGCTGGATGATAAAGATGATGAGGAAGATATGTTTGAGAGTGCTCAGAGCATGGAAATTGACGCTGAGTGGGCAGATCCCATTCAGAATACGCTGCATCATGACTCGCCTAAGGAGTCTTCATCCTCAGATTCCAATATTAGTAGCATCAGTAGCAACAAAGAATTATCACAAATCTTTCCCCAGACCCCCAAGCAATTGCTTTTGGAATGTGCTGGCACACTTTCAGAAGGAAATGTGGAGGTAGCATCGTCTATGATAAATGAACTCAGGCAGAAGGTCTCGATTCAAGGAGATCCTCCCCAAAGAATTGCAGCCTATATGGTGGAAGGACTTGCAGCTCGAATTGCTTCTTCTGGCAAAGGTATCTATAAAGCTTTGAAGTGCAAGGAACCTCCCTCTTCAGACCGTTTAGCTGCCATGCAGATACTATTCGAGGTGTGTCCGTGTTTTAAGTTTGGATTTATTGCTGCAAATGGTGCAATTACAGAGGCGGttaaagatgaaaagaagGTTCATATAATAGACTTTGACATCAATCAAGGAAGCCAATACATAACTCTAATACAAACACTTGCTTCAAGACCAGGTAAGCCACCCCGTGTGAGATTGACTGGGGTTGACGATCCTGAATCAGTCCAGCGACCTGTTGGAGGCCTAAAAAACATAGGACAGAGACTTGAAAAGCTGGCAGAAGCACTGGGATTGCCATTTGAGTTTCACGCAGTGGCATCAAGAACTTCCCTTGTTACTCCATCAATGCTCAACTGCCGTCCTGGGGAAGCACTTGTCGTGAACTTTGCATTCCAGCTTCACCACATGCCAGATGAGAGTGTTTCAACAGTAAATGAGCGAGACCAACTTCTTCGAATGGTTAAAAACCTGAATCCAAAACTTGTAACAGTTGTGGAACAAGATGTGAACACTAACACTACCCCCTTTTTACCGAGATTCGTTGAAGCCTACAATTACTACTCTGCTGTGTATGATTCTCTTGATGCCACTCTTCCTAGGGAGAGTCAGGACAGGATGAATGTTGAAAGGCAATGCTTAGCAAGGGACATTGTTAATATTGTTGCATGTGAAGGTGAGGATAGGATAGAACGGTATGAAGTTGCTGGAAAATGGAGAGCAAGAATGACAATGGCTGGCTTTACTTCATCCCCAATGAGCACAGATGTGAAAAATGCAATTCGGGAACTGATAAAGCAGTATTGTGACAGGTACAAGATGAAGGAGGAAATGGGTGCCCTGCATTTTGGTTGGGAAGACAAAAACTTGATCGTTGCTTCAGCATGGAGGTG 1742 0.4374 MSLSAELNTSSYRNAKLYSLKGTDVGSGLSSQIFCPDKHRTMYMADSYSSESYEKYFLDSPTEELIEPSSSGVSGNSFNPDGASSYQLRASPGASMGAHNPFDASFMSMRHRDVSNFGSDSLESLSPGPLDFDGPMRLKLQELERELLDDKDDEEDMFESAQSMEIDAEWADPIQNTLHHDSPKESSSSDSNISSISSNKELSQIFPQTPKQLLLECAGTLSEGNVEVASSMINELRQKVSIQGDPPQRIAAYMVEGLAARIASSGKGIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVKDEKKVHIIDFDINQGSQYITLIQTLASRPGKPPRVRLTGVDDPESVQRPVGGLKNIGQRLEKLAEALGLPFEFHAVASRTSLVTPSMLNCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKNLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVYDSLDATLPRESQDRMNVERQCLARDIVNIVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTDVKNAIRELIKQYCDRYKMKEEMGALHFGWEDKNLIVASAWR 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02026 580 MobiDBLite consensus disorder prediction 176 195 - -
Bva12g02026 580 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 579 IPR005202 -
Bva12g02026 580 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 9 579 IPR030011 GO:0003700|GO:0005634
Bva12g02026 580 Pfam GRAS domain family 211 580 IPR005202 -
Bva12g02026 580 ProSiteProfiles GRAS family profile. 201 580 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02026 Bva-Chr12 15939559 15943424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02026 1 580 GRAS Transcription Factor Family AT1G21450 64.007 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva12g02026 GRAS 6.1e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02026 - - gmx:100798897 858.981