Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02022 ATGGTACCTCCGGGGCCACCCACTCCACTTGGTGGTGCCCAGTCTGTCTCACCTTCACTTTTGAGATCAAATTCTGGAATGTTGGGAACTCAAGGAGGTCCTATGCCTTCCCAgacttctttctcttcccgCACTCAGTTTAATAACATGAACATGCTTGGGAATATGCCCAACGTGTCTTCTATACTAAACCAATCTTTTTCAAACGGGGTTCCAAATTCTGGGCTCTCTGGTCCTGGAAGCAGCCAGCATGGCAGTGTTGATACTGGAGCTGAAACAGATCCACTTTCAAGTGTGGGTAATGGGATGAATTTCAATAATACTTCGTCCTCATTTGTACAATCGACAATGGTGAACCCTGGTTCATCTGGTCAAGGTCAGGTTCAACAATTTTCAAATCCTTCTGGTAACCAGTTGTTGCCAGATCAACAACATGCCCAACAACTTGAACCTCAAAATTTCCAACATAATCAACAGTCAATGCAACAGTTCTCTGCTCCTCTTAACACtcagcaacagcagcagcagcattTTCAATCTATTCGGGCAGGGTTAAGTGGCATTGGACCAGTAAAGTTGGAGCCCCAGGTAAACAATGATCAACTTGGCCAACAGCAGCACTTGCAAACATTGAGGAATCTTGCTCCTGTGAAATTGGAACCTCAGCAAATTCCAGCCATGAGAAGTTTGGCACCAGTTAAAATGGAGCCCCAGCATCATCCTGACCAGTCATTATTTTTGCatcagcaacaacaacaacagcagcagcagcaattAATCCACATGTCAAGGCAGCCCTCTCAGGCTGCTGCTCAGTTTAATCTTTTGCACCAACAAAGACTTTTGCAATTTCAACAACACCAGCAGCAACAACAACTGTTAAAGGCAATGCCTCAACAACGGTCCCAACTACCACAGCAGTTTCAGCAGCAGAATTTGCCTTTAAGGTCTCCTGTGAAACCAGTATATGAACCAGGAATGTGCGCTAGGCGGCTAACGCATTATATGTATCAGCAACAGCATAGACCTGAAgATAACAATATTGAGTTCTGGAGGAAATTTGTTGCTGAGTATTTTGCTCCTAATGCCAAAAAGAAGTGGTGCGTTTCTATGTATGGAAGTGGCAGACAGACGACTGGAGTTTTTCCTCAGGATGTATGGCATTGTGAGATATGTAATCGCAAGCCTGGGCGTGGGTTTGAAGCGACTGTTGAGGTTCTTCCTAGGcttttcaaaataaagtatGAAAGTGGTACTTTAGAAGAGCTACTTTACGTTGACATGCCTCGTGAATATCATAATTCAGCTGGTCAGATCGTTCTAGACTATGCAAAGGCGATTCAAGAGAGTGTTTTTGAGCAGCTGCGGGTTGTTCGTGATGGTCAACTCCGAATAGTTTTCTCTCCAGACCTGAAGatATGCTCTTGGGAATTTTGTGCTAGACGCCATGAAGAGCTTATCCCCAGACGATTGTTAATACCCCAGGTTAGTCAGCTTGGAGCCGCTGCTCAAAAATACCAGTCTTTTACTCAAAATGCAACGCCTAATTTATCTGTTCCTGAGttacaaaataattgcaaTATGTTTGTTGCATCTGCCCGCCAGCTAGCAAAAGCCTTAGAAGTGCCATTAGTTAATGATTTAGGATATACAAAGAGATATGTGCGATGCCTACAGATATCAGAAGTGGTAAATAGTATGAAGGACTTAATAGATTACAGTCGAGAAACGAGGACTGGACCTATGGAGAGCTTGGCCAAATTTCCTCGTAGAACAAGTGGCTCATCTGGACTTCATAGTCAAGCTCAGCAGTCTGAAGATCAAttacagcagcagcaacagcagATGGCATCTCATAATTCAAATGGTGATCAAAACTCAGTGCAAGCTGCTGGTGTTCAAATTGCTGCCAGCAATGGCGTGGCTAGTGTAAATAACTGTGTCAACTCAGCATCTGCATCGACCACTACAAGCACCATTGTTGGACTTCTCCATCAGAACTCTATGAATTCCAGACAGCAGAGTTCTATGAATAACGCCAGCAGTCCTTATGGTGGTGGTAGTTCCATTCAAATTCCATCCCCAGGTTCTTCTAGTACGGTGCCACAAGCACAACCAAACCCATCCCCTTTTCAATCACCAACACCATCTTCATCTAACAACCCCCAACAAACATCTCACGCCGCCTTAACAGCTGCCAATCACATGAGTACAACGAACTCACCAGCAAATATTTCCTTGCAACAACAGCAGCCATCTCTTTCTGGTGAAGCTGACCCTAGTGATGCCCAGAGCTCAGTCCAGAAAATCATACATGATATGATGATGTCCAACCAAATGAATGGCACAGTTGGAATGGCGGGTGTTGGTTCTCTTGGAAATGATGTGAAAAATGTAAATGGAATTATGCAAGGGAGTACGAATACAGGACTCAACAGTGGCAACTGCATGGTGGTGGGCAATGGGGCTTTGAACAGTAGTAATTCAGGTGTTGGAGTTGGTGGATATGGCGCAATGGGTGGACTTGTTCAATCAGCAATGGTCAGTGGAATCAGAGCGGCATTAGGAAATAATTCAGTTATGAATGGTAGGGGAGGGATGGCATCCATGGCTCGCGATCAAGCTATGAATCAACAAGACTTGTCCAACCAACTACTTAATGGGATAGGAGCAGTAAATGGTTTTAACAATCTTCAATTTGACTGGAAATCGTCCCCGTG 2720 0.4235 MVPPGPPTPLGGAQSVSPSLLRSNSGMLGTQGGPMPSQTSFSSRTQFNNMNMLGNMPNVSSILNQSFSNGVPNSGLSGPGSSQHGSVDTGAETDPLSSVGNGMNFNNTSSSFVQSTMVNPGSSGQGQVQQFSNPSGNQLLPDQQHAQQLEPQNFQHNQQSMQQFSAPLNTQQQQQQHFQSIRAGLSGIGPVKLEPQVNNDQLGQQQHLQTLRNLAPVKLEPQQIPAMRSLAPVKMEPQHHPDQSLFLHQQQQQQQQQQLIHMSRQPSQAAAQFNLLHQQRLLQFQQHQQQQQLLKAMPQQRSQLPQQFQQQNLPLRSPVKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSAGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQSFTQNATPNLSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPMESLAKFPRRTSGSSGLHSQAQQSEDQLQQQQQQMASHNSNGDQNSVQAAGVQIAASNGVASVNNCVNSASASTTTSTIVGLLHQNSMNSRQQSSMNNASSPYGGGSSIQIPSPGSSSTVPQAQPNPSPFQSPTPSSSNNPQQTSHAALTAANHMSTTNSPANISLQQQQPSLSGEADPSDAQSSVQKIIHDMMMSNQMNGTVGMAGVGSLGNDVKNVNGIMQGSTNTGLNSGNCMVVGNGALNSSNSGVGVGGYGAMGGLVQSAMVSGIRAALGNNSVMNGRGGMASMARDQAMNQQDLSNQLLNGIGAVNGFNNLQFDWKSSP 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02022 906 MobiDBLite consensus disorder prediction 12 43 - -
Bva12g02022 906 Pfam LIM-domain binding protein 331 585 IPR029005 -
Bva12g02022 906 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 904 - -
Bva12g02022 906 MobiDBLite consensus disorder prediction 670 706 - -
Bva12g02022 906 MobiDBLite consensus disorder prediction 670 727 - -
Bva12g02022 906 MobiDBLite consensus disorder prediction 64 140 - -
Bva12g02022 906 Coils Coil 595 622 - -
Bva12g02022 906 MobiDBLite consensus disorder prediction 1 43 - -
Bva12g02022 906 MobiDBLite consensus disorder prediction 589 628 - -
Bva12g02022 906 MobiDBLite consensus disorder prediction 580 628 - -
Bva12g02022 906 PANTHER LIM DOMAIN-BINDING PROTEIN 1 904 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02022 Bva-Chr12 15922222 15929617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02022 1 904 C2H2 Transcription Factor Family AT1G43850 61.117 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02022 - - gmx:100787573 1305.43