Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02011 ATGGGTAGGTGTTGGGTGGTTGGAGCTTTGATTCTGGTGGGTTATGTTTTTTCGTTGTTAGGTGTTGGAGTTGAAGGGTACCCAGTTGAGGATCTGGTAGTGGAATTGCCTGGTCAACCTGAGGTTGGGTTTAAGCAGTATGCTGGGTATGTTGATGTAGATGTCAACAATGGCAGAAGCTTATTCTACTACTTTGTGGAAGCAGACAAAGACCCTGACAAGAACCCCCTCACCCTTTGGCTCAATGGAGGCCCTGGATGTTCCTCCGTTGGTGGAGGTGCCTTCACTGAATTGGGTCCTTTCTATCCTAGAGGTGATGGCCGTGGTCTCCGAAAAAATTCGATGTCCTGGAATAGAGCATCCAATCTCCTCTTTGTGGAATCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACAAGTTCAGATTATAATGCTGGAGATGCGTCCTCTGCTAGGGATATGTATTTGTTCTTGCTGAAATGGTACGACAAGTTTCCAACCTACAGATCAAGGGAACTCTTTCTTACTGGAGAAAGCTATGCAGGGCATTACATACCACAGTTGGCTGATGTTCTGTTGGACCATAATGCTCGTTCAACTGgtttcaaattcaatattaaAGGAGTTGGTATTGGAAACCCGCTTTTGAAACTTGATCGTGATATTCCAGCAACATATGAATTCTTCTGGTCTCATGGAATGATTTCTGATGAAATTGGCCTTGCCATTACGAACGATTGTGATTTTGAAGATTATACCTTTGAGAATCCTCACAATGTATCCCATTCATGCATCCATGCAATTTCTGAAGCAAATCGTGTTGTTGGCGAGTACATAAACAACTACGATGTGATTCTGGATGTTTGTTATCCATCCATAGTAGAACAAGAACTGAGATTGAAAAAGATGGCTACTAAAATAAGCTTAGGAGTAGATGTTTGTACGAGTTTTGAAAGACGCTTTTATTTCAATCTCCCTCAAGTTCAGAAGGCCCTCCATGCAAACCGCACCAATTTGCCTTACAGCTGGTCTATGTGTAGTCCTGTTCTTAATTATAGCGACACTGATGGTAACATCAACATCCTTCCAATCCTCGAAAGGATAGTTCAAAATCACATCCCAGTTTGGGTTTTCAGTGGAGACCAGGATTCTGTTGTGCCACTACTAGGTTCTCGAACACTGATTCGTGAACTGGCTCATGAGCTCAAGTTCCAGGTCACAGTTCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACCGAGTATGGAAATTTATTGACTTTTGCTACTGTGAGGGGTGCTGCCCACATGGTACCCTATGCACAGCCATCAAGAGCATTGCATTTGTTCACTTCATTTGTGCGTGGCCGCAGGTTGCCAAACACAACAAGACCTTCAATTGATGATTG 1421 0.4342 MGRCWVVGALILVGYVFSLLGVGVEGYPVEDLVVELPGQPEVGFKQYAGYVDVDVNNGRSLFYYFVEADKDPDKNPLTLWLNGGPGCSSVGGGAFTELGPFYPRGDGRGLRKNSMSWNRASNLLFVESPAGVGWSYSNTSSDYNAGDASSARDMYLFLLKWYDKFPTYRSRELFLTGESYAGHYIPQLADVLLDHNARSTGFKFNIKGVGIGNPLLKLDRDIPATYEFFWSHGMISDEIGLAITNDCDFEDYTFENPHNVSHSCIHAISEANRVVGEYINNYDVILDVCYPSIVEQELRLKKMATKISLGVDVCTSFERRFYFNLPQVQKALHANRTNLPYSWSMCSPVLNYSDTDGNINILPILERIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELKFQVTVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFTSFVRGRRLPNTTRPSIDD 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02011 473 Gene3D - 361 460 - -
Bva12g02011 473 Gene3D alpha/beta hydrolase 29 290 IPR029058 -
Bva12g02011 473 Gene3D - 314 350 - -
Bva12g02011 473 Pfam Serine carboxypeptidase 38 460 IPR001563 GO:0004185|GO:0006508
Bva12g02011 473 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Bva12g02011 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 467 IPR001563 GO:0004185|GO:0006508
Bva12g02011 473 PANTHER CARBOXYPEPTIDASE 6 467 - -
Bva12g02011 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Bva12g02011 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Bva12g02011 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Bva12g02011 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Bva12g02011 473 SUPERFAMILY alpha/beta-Hydrolases 24 467 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02011 Bva-Chr12 15862999 15866747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02011 320 463 Calmodulin-binding Proteins AT2G22960 25.000 1.05e-10 58.9