Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01995 ATGGGTTGGAAACTGGAGCTCTCGTGCATTTTCTTGGCAGCAATGGTGATTGAAGCAATGTTGTTCCATGTTACTGCTGAGCCGGTTGAAGATAAACAAGCTTTGCTTGATTTCCTTCACAACATAGGCCACCCTCACTCTCTGAGCTGGAACGAGAATTCTTCTGTGTGCACAAGCTGGAGAGGAGTGACCTGCAACAATGACCAATCAAGAGTCATAGCCATCCGGTTGCCTGGCGCTGGATTGAGCGGTCCAATCCCAAACAACACTCTTAGTCGCCTCACAGAAATCCAGACTCTGAGTCTTAGATCAAATGGTATAACAGGTCCTTTTCCTTTGGGTTTCTCTGAGCTCAAAAATTTAACCTACCTTTATCTTCAATCTAACAAGTTTTCTGGCCCATTGCCATCAGATTTTTCAGTTTGGAATAATCTTACTGTATTCAATTTATCCAATAATTCCTTTAATGGGAGCATCCCTTCTTCAATTTCACATTTGACTCATCTGGCATCTTTGATCCTAGCTAACAACTCGCTTTCGGGTGAAATTCCTGATCTCAATATTCCTAGCCTGCAAGAGCTAAACCTAGCAAACAATAAACTTAGTGGGATTGTGCCTAAATCCCTTCAGAGATTTCCAAGTGAATCCTTTTCTGGTAACAATGTTACCTATGCAAGTGCACTTCCCCCAGCTCTTCCAGTTAGCCCCCCaaaggaaaaatcaaaacttagtGAACCTGCATTGCTGGGTATCATCATTGGGGGTTGTGTACTGGGATTTACGGTTATTGCAGCTTTCATGATTCTGTGCTGCAATGACAGTGGGAGAGAAGATGGGGGGCTACCAGTGAAGtcacagaaaaaagaagtctCCCTGAAAAAAACAACTTCTGAAAGTCAAGATAAAAACAAGATGGTCTTCTTTGAGGGATGCAGTCTTGCATTTGATCTAGAGGATTTGTTGAGAGCATCTGCTGAGGTACTTGGAAAGGGAACCTTTGGTACAGCGTATAAGGCAGCTCTAGAGGATGCAACCACAGTGGTGGTGAAGAGGCTGAAGGAAGTCATTGTGGGAAAACGCGAGTTTGAACAGCAGATGGAGGTGGTGGGAAGAATTAGGCATGAAAATGTGGTTGCACTAAGGGCATATTACTATTCCAAGGAGGAGAAACTTATGGTATATGACTACTATGAACAGGGTAGCGTTTCTGCAATGTTACATGGTAAAAGAGTAGAAGGGAGGTCCCATTTGGACTGGGATACCCGGCTAAGAATTGCAATTGGTGCAGCAAGAGGTATTGCTCACGTCCACACTCAACATGGAGGGAAACTTGTCCATGGAAACATAAAAGCTTCAAACATCTTTCTCAACCCCAAGGGATTTGGTTGTGTATCTGACATTGGTTTGGCAACGTTGATGAGTCCAATACCCTCACCAGCACTGAGAAGTGCAGGATACCGTGCCCCGGAGTTAACAGACAGCCGGAAAGCAACCCATGCATCAGATGTCTACAGCTTTGGGGTGCTGCTGCTTGAGCTTCTGACTGGAAAATCCCCTATACATAACATGGGAGGTGAGGAAGTTGTCCACTTGGTTAGATGGGTAAATTCTGTGGTCAGAGAGGAGTGGACTGCAGAAGTCTTTGATGTAGAATTACTGAGGTATCCAAATATAGAGGAAGAAATGGTTGAGATGTTACAATTAGGATTGGCATGTGTAGTCCGGATTCCAGAGCAAAGGCCAAAAATGCCACATGTACTCACGATGCTGGAGGAAATACGTCGAATGAATACAGGAAATCGACCATCCTCGGAATCAAGATCAGAGGTTTCGACCCCAACAGTTATTGCAGCTGACATAGCCTCTTCCTCTGTTCCACAGTG 1883 0.4381 MGWKLELSCIFLAAMVIEAMLFHVTAEPVEDKQALLDFLHNIGHPHSLSWNENSSVCTSWRGVTCNNDQSRVIAIRLPGAGLSGPIPNNTLSRLTEIQTLSLRSNGITGPFPLGFSELKNLTYLYLQSNKFSGPLPSDFSVWNNLTVFNLSNNSFNGSIPSSISHLTHLASLILANNSLSGEIPDLNIPSLQELNLANNKLSGIVPKSLQRFPSESFSGNNVTYASALPPALPVSPPKEKSKLSEPALLGIIIGGCVLGFTVIAAFMILCCNDSGREDGGLPVKSQKKEVSLKKTTSESQDKNKMVFFEGCSLAFDLEDLLRASAEVLGKGTFGTAYKAALEDATTVVVKRLKEVIVGKREFEQQMEVVGRIRHENVVALRAYYYSKEEKLMVYDYYEQGSVSAMLHGKRVEGRSHLDWDTRLRIAIGAARGIAHVHTQHGGKLVHGNIKASNIFLNPKGFGCVSDIGLATLMSPIPSPALRSAGYRAPELTDSRKATHASDVYSFGVLLLELLTGKSPIHNMGGEEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQLGLACVVRIPEQRPKMPHVLTMLEEIRRMNTGNRPSSESRSEVSTPTVIAADIASSSVPQ 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01995 627 Pfam Protein tyrosine and serine/threonine kinase 326 538 IPR001245 GO:0004672|GO:0006468
Bva12g01995 627 PANTHER LRR RECEPTOR-LIKE KINASE 14 619 - -
Bva12g01995 627 MobiDBLite consensus disorder prediction 597 627 - -
Bva12g01995 627 ProSiteProfiles Protein kinase domain profile. 322 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01995 627 MobiDBLite consensus disorder prediction 595 627 - -
Bva12g01995 627 SUPERFAMILY Protein kinase-like (PK-like) 326 591 IPR011009 -
Bva12g01995 627 ProSitePatterns Protein kinases ATP-binding region signature. 328 359 IPR017441 GO:0005524
Bva12g01995 627 Gene3D Phosphorylase Kinase; domain 1 286 396 - -
Bva12g01995 627 Gene3D Transferase(Phosphotransferase) domain 1 398 615 - -
Bva12g01995 627 SUPERFAMILY L domain-like 31 212 - -
Bva12g01995 627 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Bva12g01995 627 Gene3D Ribonuclease Inhibitor 29 245 IPR032675 -
Bva12g01995 627 ProSiteProfiles Leucine-rich repeat profile. 190 211 IPR001611 GO:0005515
Bva12g01995 627 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515
Bva12g01995 627 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515
Bva12g01995 627 PANTHER OS05G0588300 PROTEIN 14 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01995 Bva-Chr12 15794277 15797593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01995 20 616 Receptor kinase-like Gene Family AT4G23740 56.390 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva12g01995 PK_Tyr_Ser-Thr 2.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01995 - - gmx:100813065 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01995 12 15794277 15797593 Bva12g01995 12 15794277 15797593 ECH