Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01989 ATGTCCTTAGCAGTGCTAGACGCGCTTGACTCAGCTCGCACACAATGGTACCACTTCACAGCCATTGTGATTGCTGGCATGGGCTTCTTCACCGATGCCTACGATCTCTTCTGCATCTCAACCGTTTCCAAACTCTTAGGTCGCCTATATTACTTCGACCCCAGTTCAAAAAAACCCGGAAAGCTGCCCCTAAATGTTAACAACTTTGTTATCGGAGTGGCCCTTGTCGGAACCCTCTGTGGCCAATTATTCTTTGGTTGGCTCGGAGACAAAGTTGGCCGCAAGAAAGTCTATGGCTTCACCCTCGTTCTCATGGTCTTTTGTGCCCTTTGCTCAGGCTTATCTTTTGGTTCAACAGCACATTCCGTGATGACGACACTTTGCTTCTTCAGGTTCTGGCTCGGCTTTGGCATTGGCGGCGACTACCCTCTCTCAGCCACCATCATGTCCGAATATGCCAACAAAAGAACACGTGGAGCTTTTATTGCGGCCGTGTTTGCGATGCAAGGCGTGGGAATTGTTTTTGCTGGAATGGTATCCATGCTCGTTTCAAAAATGTTCTTATCTTACACTGGAAAAACTCCCACTTATAATGAAAACCGTGTCCTGTCCACACAACCTGAGGCTGACTTCATGTGGAGGATAGTGCTTATGATTGGGGCTGTGCCTGCCGCGTTGACATACTACTGGCGAATGAAGATGCCCGAAACAGGTCGTTACACGGCTCTTATCGAAGGGAATGCTAAACAAGCTGCTTCAGACATGGCCAGAGTTCTTGACATCGAGATACAAGCAGAGCAAGAGAAATTATCACAATTCAAAGCTTCTAATGAATACTCACTGACGTCAAATGAGTTCATTCAGCGGCACGGGAAACATTTGATTGGCACCATGAGCACGTGGTTCTTGTTGGACATTGCCTTTTACAGCCAGAACCTGACCCAGAAAGATATATTCCCAGCAATAGGACTCGTACCCGCGGAGGCGGACATGGATGCTCTCTCGGAAGTGTATAAGACATCAAAGGCCATGTTCGTGATTGCACTGTTTGGAACATTCCCAGGTTACTGGTTCACTGTCTACTTCATTGAGAAGATAGGGCGCTTCAAGATCCAACTCGTTGGCTTCCTCATGATGTCTGTCTTCATGTTAGTCATtggtattaaatataattacctTAAGCACGAAAACCACATGCTCTTCGCTTTGCTGTATGGGCTGACGTTCTTCTTCGCCAACTTTGGCCCCAACAGCACAACCTTTGTGCTGCCGGCGGAGCTGTTCCCGACACGGGTCAGGTCTACGTGTCATGCGCTGAGCGCGGCAGCAGGGAAAGCCGGTGCAATGGTGGGTGCATTTGGGATACAGAGTTACACAGTTAACGGTGAGGAGGGAAAAATTCGGACAGCTATGAAGATTCTGGCGGTGACCAACATGTTGGGATTTTTCTGCACATTCTTGGTAACTGAAACTAAAGGGCGCTCTCTGGAAGAAATTTCCGGCGAGGACGACAGAGAAAATGAACTCACACCAACACCCTCAGCTAGGGTCACGGTTCCTAGAAATGGAAGTCACGTAGAATCAATGTG 1589 0.4783 MSLAVLDALDSARTQWYHFTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPSSKKPGKLPLNVNNFVIGVALVGTLCGQLFFGWLGDKVGRKKVYGFTLVLMVFCALCSGLSFGSTAHSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIVFAGMVSMLVSKMFLSYTGKTPTYNENRVLSTQPEADFMWRIVLMIGAVPAALTYYWRMKMPETGRYTALIEGNAKQAASDMARVLDIEIQAEQEKLSQFKASNEYSLTSNEFIQRHGKHLIGTMSTWFLLDIAFYSQNLTQKDIFPAIGLVPAEADMDALSEVYKTSKAMFVIALFGTFPGYWFTVYFIEKIGRFKIQLVGFLMMSVFMLVIGIKYNYLKHENHMLFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGAMVGAFGIQSYTVNGEEGKIRTAMKILAVTNMLGFFCTFLVTETKGRSLEEISGEDDRENELTPTPSARVTVPRNGSHVESM 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01989 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 493 IPR020846 GO:0022857
Bva12g01989 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 509 - -
Bva12g01989 529 CDD MFS_PhT 22 492 - -
Bva12g01989 529 TIGRFAM 2A0109: phosphate:H+ symporter 6 502 IPR004738 GO:0005315|GO:0006817|GO:0016021
Bva12g01989 529 MobiDBLite consensus disorder prediction 511 529 - -
Bva12g01989 529 Pfam Sugar (and other) transporter 22 500 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bva12g01989 529 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 2 509 - -
Bva12g01989 529 SUPERFAMILY MFS general substrate transporter 9 500 IPR036259 -
Bva12g01989 529 MobiDBLite consensus disorder prediction 497 529 - -
Bva12g01989 529 Gene3D MFS general substrate transporter like domains 17 515 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01989 Bva-Chr12 15747580 15749169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01989 2 508 Inorganic Solute Cotransporters AT5G43350 62.620 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01989 K08176 - gmx:100802261 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01989 12 15747580 15749169 Bva12g01989 12 15747580 15749169 ECH