Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01974 ATGATGGATTGCAACAAGGATGAGGCAGCTAGGGCTAAAGAAATAGCAGAgaggaaattttcaaaaagggATTATGCTGGTGCAAAGAAGTTTGCTCTAAAGGCTGTCAGTTTGTATCCTGAACTGGAGGGTCTCTCCCAGTTTTTGACAACTCTTGATGTTTATATTGCTGCTGAGAATAAAGTAAGTGGAGAAATGGATTGGTATGGTATTCTCGGTGTGAACCCCTTTGCTGATGACGATACAGTTAGAAAACAGTACAGGAAGCTGGCTTTGACTCTTCACCCTGACAAAAACAAGTCTTCAGGCGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCGTGGGTTTTGTTATCAGATAAAGCCAAGAGACTAGCGTATAACCAGAAGAGGAGTTTGAAAGGATACCACCATAAACCTCCCAACCTTGGGGGTTCTCAGTCAGAAGTGCCTAGTTCAAAtggttttcataattttaccaAGAATGTAACTTCAAATGTGAGGACTGGAAATAATAATGCTCGGGCAGGTCCTACCTCAGTTCCTCCTCCACGTAAAAAGGCTGATACCTTTTGGACTATTTGTAATAGGTGCAAGACTCATTATGAATATCTCAGGATTTATTTGAACCATACCCTCCTATGTCCTAACTGTAATGAGGCTTTCCTGGCTGTTGAGAGGGCTCCACCTCCCAATGTTTTTAAGTCATCAAATTGGTCTCCTCGTCAACACCATCAGAGTTCTCAACATTATGGTGCAAGTAATAATACAAGCTTTCAGTGGGGTTCTGTCTCCAGAATGGCTGGTTTTGGTAGCACAGATGGTTCATCATCCGTTGCTGCTCAAGCTGCGAGCGTTGTGCAGCAGGCAAGTGAGAAAGTGAGAAGAGAACATGAGGGAGCACCATCAATTGCTGAATGGCAGAGGAGTCAAATGTCTAAGAGGACTGATGGTTCGTTTCATAAAGTGgaaaaatcttttaagaaGAGGAGGACAGATGATATTCGTATGAATGGTTATCAAGGATACATGGCAAATCACATGGCAACTGGACAGGGAGCAGCTGGTTTGGGATGTGTTTCTGACTCAAGAAAGCCTAACTTGGAAACAGAAAGGAGCTATGGTTTTTGGGGTACTACTTCAAAGCCTTACAGCACAAGAGAGTTGTCAATGTTTGAAATACGAAACATGTTGATGGATAAGGCACGGATTGAAATTCGCAAGAAACTTGAAGAATGGAAATCAGAAACTGAAGCTAAGATCACAAacaaggagaaagaaaataagagagaaaaaagcaCATTGTGTGACAAAGCAGCTGATCCAAAAACGCTTGGAGAGTCCAATCTTAATGGTAAAGGTTATCAGGACGGTGATTCTTTTGTTGTCACACCTGATAATACacagaaggaaaataaagcCTTCATCTCAATCAATGTTCCCGACTCTGATTTTCACAATTTTGATTTGGATAGGGATGAAAAATCCTTTGGCGAGGACCAGGTCTGGGCTGCAtacgatgatgatgatggaatGCCTCGATATTATGCTCGAATTCACAAGGTGATCTCTATGAAGCCATTTAGAATGCGAATCAGTTGGCTTAACTCTCGAAGCAACAGTGAACTGGGACCTATAGATTGGATAGGTTCtggattttataaaacttGTGGGGATTTTAGGACTGGCAAGCATGAAATAACCGAATCGTTAAATTCTTTTTCGCATAAGGTTAAGTGGACCAAAGGCAATAGAGGAGTTATTCGCATTTTTCCTGGCAAGGGTGAGGTCTGGGCTCTTTATAGAAACTGGTCTCCAGATTGGAATGAGCATACACCAGATGAAGTGATACACAAGTATGACATGGTAGAGGTgcttgaagattttgatgagGAGCAAGGTATATTAGTTACCCCGCTTATCAAAGTTGCTGCCTTCAGGACTGTGTTTCAAAGGCACCTTGACACTGATCAGGTGAGAAGGATTCCTAAGGAGGAGATGTTTCGCTTTTCTCATCAGGTTCCAAACTACTTGCTTACAGGCCAAGAAGCTCCTAATGCTCCTAAAGGTTGTCGAGAGTTGGATCCTGCAGCTACTCCGTTAGACCTCATTCAGGTAAAAACAGAAGCTGATGATGGATCGAGTAATGTTAAAAAGCCAGTGGAAGGCACATCACCCAAAAAAGATGAGGTTGAGATGGAGGAGAATGCTTCAGAAACTAGCACGGGAGATATGGTAGTCGAGGATGATGTTAAACAGACAACTGATGATAGATG 2276 0.4011 MMDCNKDEAARAKEIAERKFSKRDYAGAKKFALKAVSLYPELEGLSQFLTTLDVYIAAENKVSGEMDWYGILGVNPFADDDTVRKQYRKLALTLHPDKNKSSGAEGAFKLVSEAWVLLSDKAKRLAYNQKRSLKGYHHKPPNLGGSQSEVPSSNGFHNFTKNVTSNVRTGNNNARAGPTSVPPPRKKADTFWTICNRCKTHYEYLRIYLNHTLLCPNCNEAFLAVERAPPPNVFKSSNWSPRQHHQSSQHYGASNNTSFQWGSVSRMAGFGSTDGSSSVAAQAASVVQQASEKVRREHEGAPSIAEWQRSQMSKRTDGSFHKVEKSFKKRRTDDIRMNGYQGYMANHMATGQGAAGLGCVSDSRKPNLETERSYGFWGTTSKPYSTRELSMFEIRNMLMDKARIEIRKKLEEWKSETEAKITNKEKENKREKSTLCDKAADPKTLGESNLNGKGYQDGDSFVVTPDNTQKENKAFISINVPDSDFHNFDLDRDEKSFGEDQVWAAYDDDDGMPRYYARIHKVISMKPFRMRISWLNSRSNSELGPIDWIGSGFYKTCGDFRTGKHEITESLNSFSHKVKWTKGNRGVIRIFPGKGEVWALYRNWSPDWNEHTPDEVIHKYDMVEVLEDFDEEQGILVTPLIKVAAFRTVFQRHLDTDQVRRIPKEEMFRFSHQVPNYLLTGQEAPNAPKGCRELDPAATPLDLIQVKTEADDGSSNVKKPVEGTSPKKDEVEMEENASETSTGDMVVEDDVKQTTDDR 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01974 758 SUPERFAMILY Chaperone J-domain 63 156 IPR036869 -
Bva12g01974 758 MobiDBLite consensus disorder prediction 292 322 - -
Bva12g01974 758 SMART dnaj_3 66 123 IPR001623 -
Bva12g01974 758 PANTHER BNAC03G44070D PROTEIN 2 717 - -
Bva12g01974 758 MobiDBLite consensus disorder prediction 417 438 - -
Bva12g01974 758 MobiDBLite consensus disorder prediction 134 186 - -
Bva12g01974 758 CDD DnaJ 67 120 IPR001623 -
Bva12g01974 758 Gene3D DnaJ domain 64 176 IPR036869 -
Bva12g01974 758 MobiDBLite consensus disorder prediction 417 458 - -
Bva12g01974 758 MobiDBLite consensus disorder prediction 712 735 - -
Bva12g01974 758 MobiDBLite consensus disorder prediction 145 178 - -
Bva12g01974 758 Pfam DnaJ domain 67 128 IPR001623 -
Bva12g01974 758 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Bva12g01974 758 MobiDBLite consensus disorder prediction 707 758 - -
Bva12g01974 758 PRINTS DnaJ domain signature 103 123 IPR001623 -
Bva12g01974 758 PRINTS DnaJ domain signature 87 102 IPR001623 -
Bva12g01974 758 PRINTS DnaJ domain signature 69 87 IPR001623 -
Bva12g01974 758 Pfam Domain of unknown function (DUF3444) 477 683 IPR024593 -
Bva12g01974 758 Coils Coil 407 434 - -
Bva12g01974 758 PANTHER HEAT SHOCK PROTEIN-LIKE 2 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01974 Bva-Chr12 15636939 15641694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01974 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.479 6.13e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01974 - - gmx:100814722 1107.82