Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01968 ATGGCGCCGGATTCCAAAGCGAAGGATGCTCGCCAGAAAAGACTCAGAATCCGGCGACTCAAATGCACATGTGAAGCCAAGATCCACGTCGCTGTCACCGGCAGAGACCAAGGGAGTTCCTCCGGGGaggagaaaaataatgttcatccttataaaaaggaaagagagttTCCTGAATCAATGCAGATATCGTTATCGGTAACAACATCGGAGGGTGATCGATCAGTATTGCGAAATGGCGCGGTTTTGACGGATTTCGGAGGTAAGAAATGTGAAGGAAATAGCGATCGGAAGGAGTTATCTTGCGGTTCGGTATCGGTGATTGGGAGCAGGAAAGATATGGAAGATGCTGTGAGCATAGAAATGGGGTTGGCAGTGAAAGATAAAAGGAAGTGTGACTTCTTTGCCGTTTATGACGGTCACAGTGGGCCTCAAGTGGCGAAGGCGTGCCGGGAAAGGTTGCACCAACTGGTGAGGGAAGAGGTGGAAAGGCTTGGAAGTGGAAATACGGTGGATTGGGAGGGAATGATGGAAGGGTGTTTTGGTAAAATGGACAGAGAGCTGGCAGATAATGCGGCAGTAAGAACTGTTGGTTCCACGGCGGTTGTAGCCTTGGTGGCAGATGAAGTGGTGGTTGTGGCCAATTGCGGTGACTCTAGAGCTGTAATGGGGAGAGGAGGTGAAGCATTGGCTCTGTCTATTGATCATAAGCCAGAGCGACCTGATGAGTTGACGCGAATTGAAGCCGCTGGTGGAAGGGTCATAAACTGGAATGGTCATCGCGTTCTAGGAGTTCTTGGTACTTCCAGATCTATAGGAGACCAATACCTTCGGCCATACGTAATATGCAAACCAGAAGTGACGGTGACGAGGCGAAGTAACAAGGATGAATTTCTTATACTTGCCAGCGATGGCTTGTGGGATGTGGTCTCCAATGAAGTTGCGTGCCAAGTTGTAAGGAAATGCCTAAGTGGCCAAATTAGAAAAGTAACCTCAGAGGTTGAGAATCAAAGCCGGGCCGCCGAGGCTGCAGCCCTTTTGACTGAGCTTGCACTGGCCAAAGGAAGCAGAGATAACACCAGTGTCATAGTAGTTGAGCTAAGCAACGATAAAATCTA 1118 0.4776 MAPDSKAKDARQKRLRIRRLKCTCEAKIHVAVTGRDQGSSSGEEKNNVHPYKKEREFPESMQISLSVTTSEGDRSVLRNGAVLTDFGGKKCEGNSDRKELSCGSVSVIGSRKDMEDAVSIEMGLAVKDKRKCDFFAVYDGHSGPQVAKACRERLHQLVREEVERLGSGNTVDWEGMMEGCFGKMDRELADNAAVRTVGSTAVVALVADEVVVVANCGDSRAVMGRGGEALALSIDHKPERPDELTRIEAAGGRVINWNGHRVLGVLGTSRSIGDQYLRPYVICKPEVTVTRRSNKDEFLILASDGLWDVVSNEVACQVVRKCLSGQIRKVTSEVENQSRAAEAAALLTELALAKGSRDNTSVIVVELSNDKI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01968 372 CDD PP2Cc 101 367 IPR001932 -
Bva12g01968 372 Gene3D - 96 371 IPR036457 -
Bva12g01968 372 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 82 368 - -
Bva12g01968 372 ProSiteProfiles PPM-type phosphatase domain profile. 101 367 IPR001932 -
Bva12g01968 372 Pfam Protein phosphatase 2C 103 360 IPR001932 -
Bva12g01968 372 SMART PP2C_4 91 365 IPR001932 -
Bva12g01968 372 PANTHER ALPHABET, ISOFORM E-RELATED 82 368 - -
Bva12g01968 372 SUPERFAMILY PP2C-like 99 369 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01968 Bva-Chr12 15601729 15604169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01968 85 367 PP2C-type Phosphatase Gene Family AT2G29380 49.007 3.10e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01968 K14497 - gmx:100807235 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01968 12 15601729 15604169 Bva12g01968 12 15601729 15604169 ECH