Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01953 ATGCCTCTGACAGACTCTAACGATGCGCAAAACTTTGATGATAGAATTCTTTTCCCTGTTGAAGAGATTGTACAGCACCCATTGCCTGGATATGTAGTGCCGACTTCATTAAGTTTCAGTCCTGATGATAGCTTGATTGCTTATTTGTTTAGTCCTGATAATACATTGAATAAGAGAGTATTTGCTTTTGATCTGAGGAACAATAAACAAGAATTGTTATTCAGTCCCCCTGATGGTGGCCTTGATGAGGGTAATATATCTCTTGAAGAGAAGTTGTGGAGGGAGAGGTTGAGGGAGCGAGGGTTAGGAGTGACACGATATGAATGGGTGAAGACAAGCTCAAAAAGGAAAGCAATCATGGTGCCATTGCCTGCTGGGGATATTTCCTATTCAAAAGCAGAGCTCAGGCTTCGAAATACACCATGTTCACCAATTATTGATCCTCATTTATCCCCTGATGGGTCAATGCTAGCTTATATAAGAGACTCTGAGCTGTATGTTCTGAGTCTATTGTCTGATGAATCAAAGCAGTTGGCCTATGGTGCCAAGGGAAACGGTTTGACTCACGGCCTTGCTGAATATATAGCTCAGGAAGAGATGGATAGGAAAACTGGGTATTGGTGGTCACTAGACAGTAAATACATTGCATTCACGGAAGTTGATTCTTCTGAAATACCACTTTTCAGAATTATGCACCAAGGTAAGAGCTCTTTTGGATCAGAAGCACAGGAAGACCATCCTTATCCTTTTGCAGGAGTTTCAAATGTTAAAGTTCGCCTTGGGGTAGTTCCAGTTGCGGGAGGTTCTGTTTCTTGGATGGATTTTCTGTGTGGTGGAAGGGATCAGCAAAACAACGATGAAGAATATTTGGCAAGAGTCAATTGGATGTATGGAAACATTCTCACAGCTCAAGTCTTGAACAGGCAGCacaccaaaattaaaatcattaagtTTGATATCAGAACGGGTCAAAGGAAAACTATATTGGAGGAAGAAAACAGCACATGGATTAATATACACGACTGTTTCATACCTCTTGATAAAGGAGTTGCTAAGTTTTCTGGGGGATTTATCTGGGCTAGTGAGAAAACGGGATTTAGACATCTTTATCTTCATGATGCAAATGGAACTTGTTTAGGACCCATCACTGAAGGTGAATGGATGGTTGAGCAAATTGCTGGTGTGAATGAAGCTACGGGTCTAATATATTTCACTGGTACCTTGCATGGGCCTTTGGAGTCGAATCTATATTACACTAAGCTTTTTGTTGATGGAAGTCAACAGCTGCAGGCCCCTGTTAGACTTACTCATGGCAAGGGAAAACATGTTATCCTTGATCATCACATGCGAAGTTTTGTTGATATCAATGATTCTCTTGATTGTCCTCCTAGGGTCTTACTTCGTTCATTAGAGGATGGAAGCACAATCATGCCTCTGTTTGAGCAGCCAGTTACAATTCCAAGGTTCAAAAGGCTTCAACTTGAGCCGCCAGAGATGGTCGAAATACAGGCTAAAGATGGCACCCCATTGTATGGGGCTCTATATAAGCCTGATGCATCCAGATTTGGACCTCCACCTTACAAAACTATGATCAATGTTTATGGTGGACCATGTGTACAGCTGGTTAGTAATTCTTGGACGAGTTCAGTTGATATGAGAGCACAATATTTACGAAGCCAAGGAATCTTAGTTTGGAAGTTAGACAATAGAGGAACTGCTAGACGGGGATTAAAGTTTGAAGGCTGTATCAAGCACAATCTTGGTCAAATTGATGCTGACGATCAGCTAACCGGAGCTGAGTGGCTCGTTAAACAAGGGCTTGCAAAAGCTGGTCACATTGGATTGTATGGGTGGAGCTATGGTGGTTATCTCTCTGCTATGGCGCTGTTGAGATATCCGGATTTCTTCAAGTGTGGTATTGCCGGTGCCCCTGTTACTTCATGGGATGGATATGACACATTTTATACAGAGAAGTATATGGGTTTGCAATCTGAAAATCAATCAGGGTATGAAAGTGGCTCTGTGCTGCAGCATGTGCACGGGATGAAAGGACGTTTGATGATCGTGCATGGCATGATTGATGAGAATGTACATTTTAGGCACACTGCAAGGCTTGTCAATGCGCTTATGGCTGCTGGAAAACCATATGATCTAGTAATTTTCCCAGATGAGCGTCACATGCCACGGCGCCACAGAGATAGAGTTTACATGGAAGAGAGAATCTGGGATTTTATAGACAAGAACCTCTA 2249 0.4206 MPLTDSNDAQNFDDRILFPVEEIVQHPLPGYVVPTSLSFSPDDSLIAYLFSPDNTLNKRVFAFDLRNNKQELLFSPPDGGLDEGNISLEEKLWRERLRERGLGVTRYEWVKTSSKRKAIMVPLPAGDISYSKAELRLRNTPCSPIIDPHLSPDGSMLAYIRDSELYVLSLLSDESKQLAYGAKGNGLTHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKSSFGSEAQEDHPYPFAGVSNVKVRLGVVPVAGGSVSWMDFLCGGRDQQNNDEEYLARVNWMYGNILTAQVLNRQHTKIKIIKFDIRTGQRKTILEEENSTWINIHDCFIPLDKGVAKFSGGFIWASEKTGFRHLYLHDANGTCLGPITEGEWMVEQIAGVNEATGLIYFTGTLHGPLESNLYYTKLFVDGSQQLQAPVRLTHGKGKHVILDHHMRSFVDINDSLDCPPRVLLRSLEDGSTIMPLFEQPVTIPRFKRLQLEPPEMVEIQAKDGTPLYGALYKPDASRFGPPPYKTMINVYGGPCVQLVSNSWTSSVDMRAQYLRSQGILVWKLDNRGTARRGLKFEGCIKHNLGQIDADDQLTGAEWLVKQGLAKAGHIGLYGWSYGGYLSAMALLRYPDFFKCGIAGAPVTSWDGYDTFYTEKYMGLQSENQSGYESGSVLQHVHGMKGRLMIVHGMIDENVHFRHTARLVNALMAAGKPYDLVIFPDERHMPRRHRDRVYMEERIWDFIDKNL 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01953 749 Gene3D - 19 489 - -
Bva12g01953 749 SUPERFAMILY alpha/beta-Hydrolases 496 749 IPR029058 -
Bva12g01953 749 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 124 463 IPR002469 GO:0006508
Bva12g01953 749 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 16 739 - -
Bva12g01953 749 Pfam Prolyl oligopeptidase family 549 749 IPR001375 GO:0006508|GO:0008236
Bva12g01953 749 Gene3D alpha/beta hydrolase 490 749 IPR029058 -
Bva12g01953 749 PANTHER DIPEPTIDYL-PEPTIDASE 4-RELATED 16 739 - -
Bva12g01953 749 SUPERFAMILY DPP6 N-terminal domain-like 33 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01953 Bva-Chr12 15495862 15500393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01953 497 740 Carbohydrate Esterase AT5G36210 23.529 7.09e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01953 K01278 - gmx:100812178 1311.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01953 12 15495862 15500393 Bva12g01953 12 15495862 15500393 ECH