Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01946 ATGGGGAAGAAAGGAGGTGGTTGGTTCTCCTCTGTGAAGAAAGTTTTCAAGTCATCTTCTAAGGAGTCGCCGGACTCGGAGAAGAAGAAGGAAAGTGCAGAGAAATGGCAGCACGAGGCGCCAAAAGTGGTGTCTTTCGAGCATTTTCTAGCAGAGAGTTCTCCAGATAATATTGCCATTGAGGGAAGCACTGCGTCAACGCCTGTGACTGAAGATAGAAACCATGCCATTGCGGTGGCCGCGGCAACAGCAGCAGCGGCTGAAGCTGCAGTTGCCGCCGCTCAAGCAGCTGCTAGAGTGGTTCAACTGGCAGGTTATGGACGCCATTCCCAGGAAGAAAGAGCAGCAACGCTGATTCAATCATACTACAGAGGTTACCTGGCTCGACGAGCGCTGCGTGCTTTGAAGGGATTAGTGAGACTGCAAGCACTTGTGAGGGGCCATAATGTGCGTAAACAAGCGCAGATGACAATGCGCTGTATGCAAGCATTAGTTCGAGTGCAGGCCAGGGTGCGAGCTCGCAGACTCCAGTTAACCCATGAGAAGCTTCAGAAGAAAGTGGAGGACCACGAGCAAAGAGATCTTGATGAAGATCCAAGGCCAGTGACTATGACTATGATGAGCCCCTTGACAAGACATAACATTGATAGTTGGGACAACAGGCGTCAGAGCAGCCAGAAAATCAAGGAAAACGACTTAAGGAGAAACGAAGCTATAATGAAGAGGGAAAGAGCTCTTGCTTATGCTTTCAACTATCAACAGCAACAGCAGAAGCAGTTTCTACCAACGGATCCTTACGGTGACGATATTAGTGACTATGCTAATGATCGTGAAAAGGCCCAATGGGGTTGGAACTGGTTGGATAGTTGGATGTCATCGGAACCACGCCAAGTTAGACAACTGGGGCAACGTGAAACCTCTTATATCACTATTGCTGCTACAACTTCCACCACCGCAGATGACATGTCTGAGAGGACCGTAGAAATGGACACTGCTGCACCTTCACCTTCAGGCAACACTAATATGGGCCTTGTCAACAATGACTTGCCCAATTCAAGCCCAATAATTAGCAAGCAAAACCATAGCAAGCTCAGTTACATGGCGCCAACCGAAGCTGCTAAGGCCAAGGTGCGGAGTCCAGGCCCAACTAGGCCAAGTGGTCCATCTGGGCCTAAGTGGAACTCTTCAACAAGGAGAGCCTCTCTTACGGGGTCGGGTTGTGACTCATCCAGCCCCACTGTGACTACGGTCTATCAGTTTCCGAGAAGcccaaacccaaaaataaatgggCTTCGCCCAATGTCTAGACGGATTGCTGGTGGCAGCCCAGATTGTATTGGAGTTGAGGATTGGGCCATGCCTCTTGGAGCCCATGGTTGGGCATG 1385 0.4946 MGKKGGGWFSSVKKVFKSSSKESPDSEKKKESAEKWQHEAPKVVSFEHFLAESSPDNIAIEGSTASTPVTEDRNHAIAVAAATAAAAEAAVAAAQAAARVVQLAGYGRHSQEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLTHEKLQKKVEDHEQRDLDEDPRPVTMTMMSPLTRHNIDSWDNRRQSSQKIKENDLRRNEAIMKRERALAYAFNYQQQQKQFLPTDPYGDDISDYANDREKAQWGWNWLDSWMSSEPRQVRQLGQRETSYITIAATTSTTADDMSERTVEMDTAAPSPSGNTNMGLVNNDLPNSSPIISKQNHSKLSYMAPTEAAKAKVRSPGPTRPSGPSGPKWNSSTRRASLTGSGCDSSSPTVTTVYQFPRSPNPKINGLRPMSRRIAGGSPDCIGVEDWAMPLGAHGWA 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01946 460 MobiDBLite consensus disorder prediction 15 38 - -
Bva12g01946 460 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Bva12g01946 460 Pfam IQ calmodulin-binding motif 139 154 IPR000048 GO:0005515
Bva12g01946 460 Pfam IQ calmodulin-binding motif 113 133 IPR000048 GO:0005515
Bva12g01946 460 Coils Coil 166 193 - -
Bva12g01946 460 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Bva12g01946 460 MobiDBLite consensus disorder prediction 18 38 - -
Bva12g01946 460 MobiDBLite consensus disorder prediction 329 356 - -
Bva12g01946 460 PANTHER IQ-DOMAIN 21 1 433 - -
Bva12g01946 460 MobiDBLite consensus disorder prediction 387 422 - -
Bva12g01946 460 PANTHER IQ-DOMAIN 5-RELATED 1 433 - -
Bva12g01946 460 Gene3D - 111 154 - -
Bva12g01946 460 MobiDBLite consensus disorder prediction 328 356 - -
Bva12g01946 460 SMART iq_5 111 133 IPR000048 GO:0005515
Bva12g01946 460 SMART iq_5 134 155 IPR000048 GO:0005515
Bva12g01946 460 MobiDBLite consensus disorder prediction 369 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01946 Bva-Chr12 15451038 15454538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01946 1 450 IQD Protein Family AT3G49260 50.520 1.80e-105 320
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01946 12 15451038 15454538 Bva12g01946 12 15451038 15454538 ECH